Gene : Eucgr.H00376 E. grandis v2.0
Defline:  (1 of 6) PTHR10359 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III Genomic Order:  118
Name:  ? Eucgr.H00376 Secondary Identifier:  ? PAC:32041172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00376 0.5kb upstream 0.5kb upstream 6197 true Chr08: 1744501-1750697 Eucalyptus grandis
Eucgr.H00376 0.5kb upstream 0.5kb upstream 500 false Chr08: 1744501-1745000 Eucalyptus grandis
Eucgr.H00376 0.5kb downstream 0.5kb downstream 6197 true Chr08: 1745001-1751197 Eucalyptus grandis
Eucgr.H00376 0.5kb downstream 0.5kb downstream 500 false Chr08: 1750698-1751197 Eucalyptus grandis
Eucgr.H00376 1.0kb upstream 1.0kb upstream 6697 true Chr08: 1744001-1750697 Eucalyptus grandis
Eucgr.H00376 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1744001-1745000 Eucalyptus grandis
Eucgr.H00376 1.0kb downstream 1.0kb downstream 6697 true Chr08: 1745001-1751697 Eucalyptus grandis
Eucgr.H00376 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1750698-1751697 Eucalyptus grandis
Eucgr.H00376 2.0kb upstream 2.0kb upstream 7697 true Chr08: 1743001-1750697 Eucalyptus grandis
Eucgr.H00376 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1743001-1745000 Eucalyptus grandis
Eucgr.H00376 2.0kb downstream 2.0kb downstream 7697 true Chr08: 1745001-1752697 Eucalyptus grandis
Eucgr.H00376 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1750698-1752697 Eucalyptus grandis
Eucgr.H00376 5.0kb upstream 5.0kb upstream 10697 true Chr08: 1740001-1750697 Eucalyptus grandis
Eucgr.H00376 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1740001-1745000 Eucalyptus grandis
Eucgr.H00376 5.0kb downstream 5.0kb downstream 10697 true Chr08: 1745001-1755697 Eucalyptus grandis
Eucgr.H00376 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1750698-1755697 Eucalyptus grandis
Eucgr.H00376 10.0kb upstream 10.0kb upstream 15697 true Chr08: 1735001-1750697 Eucalyptus grandis
Eucgr.H00376 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1735001-1745000 Eucalyptus grandis
Eucgr.H00376 10.0kb downstream 10.0kb downstream 15697 true Chr08: 1745001-1760697 Eucalyptus grandis
Eucgr.H00376 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1750698-1760697 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041361 5273 Angiosperm View MSA
124045015 5270 Rosid Singleton cluster - no MSA
123745543 5271 Pentapetalae View MSA
122791789 5272 Eudicot View MSA
121344873 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.72607 0.0 14.3165    
cufflinks 9.39582 0.0 22.1617   High
cufflinks 4.50751 0.0 11.489   Low
cufflinks 5.60898 0.0 13.8994    
cufflinks 8.44994 0.0 20.1961   High
cufflinks 4.80735 0.0 12.3419    

0 Strain