Gene : Eucgr.H00377 E. grandis v2.0
Defline:  (1 of 189) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  119
Name:  ? Eucgr.H00377 Secondary Identifier:  ? PAC:32045063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00377 0.5kb upstream 0.5kb upstream 2128 true Chr08: 1772516-1774643 Eucalyptus grandis
Eucgr.H00377 0.5kb upstream 0.5kb upstream 500 false Chr08: 1774144-1774643 Eucalyptus grandis
Eucgr.H00377 0.5kb downstream 0.5kb downstream 2128 true Chr08: 1772016-1774143 Eucalyptus grandis
Eucgr.H00377 0.5kb downstream 0.5kb downstream 500 false Chr08: 1772016-1772515 Eucalyptus grandis
Eucgr.H00377 1.0kb upstream 1.0kb upstream 2628 true Chr08: 1772516-1775143 Eucalyptus grandis
Eucgr.H00377 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1774144-1775143 Eucalyptus grandis
Eucgr.H00377 1.0kb downstream 1.0kb downstream 2628 true Chr08: 1771516-1774143 Eucalyptus grandis
Eucgr.H00377 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1771516-1772515 Eucalyptus grandis
Eucgr.H00377 2.0kb upstream 2.0kb upstream 3628 true Chr08: 1772516-1776143 Eucalyptus grandis
Eucgr.H00377 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1774144-1776143 Eucalyptus grandis
Eucgr.H00377 2.0kb downstream 2.0kb downstream 3628 true Chr08: 1770516-1774143 Eucalyptus grandis
Eucgr.H00377 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1770516-1772515 Eucalyptus grandis
Eucgr.H00377 5.0kb upstream 5.0kb upstream 6628 true Chr08: 1772516-1779143 Eucalyptus grandis
Eucgr.H00377 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1774144-1779143 Eucalyptus grandis
Eucgr.H00377 5.0kb downstream 5.0kb downstream 6628 true Chr08: 1767516-1774143 Eucalyptus grandis
Eucgr.H00377 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1767516-1772515 Eucalyptus grandis
Eucgr.H00377 10.0kb upstream 10.0kb upstream 11628 true Chr08: 1772516-1784143 Eucalyptus grandis
Eucgr.H00377 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1774144-1784143 Eucalyptus grandis
Eucgr.H00377 10.0kb downstream 10.0kb downstream 11628 true Chr08: 1762516-1774143 Eucalyptus grandis
Eucgr.H00377 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1762516-1772515 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051242 5270 Rosid View MSA
123753438 5271 Pentapetalae View MSA
122775106 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.295689 0.0 1.0074 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.680315 0.0 2.09108    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.24276 0.0 3.55318    
cufflinks 0.89461 0.0 2.64499    

0 Strain