Gene : Eucgr.H00317 E. grandis v2.0
Defline:  (1 of 1) KOG3118 - Disrupter of silencing SAS10 Genomic Order:  68
Name:  ? Eucgr.H00317 Secondary Identifier:  ? PAC:32044423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00317 0.5kb upstream 0.5kb upstream 9882 true Chr08: 1158140-1168021 Eucalyptus grandis
Eucgr.H00317 0.5kb upstream 0.5kb upstream 500 false Chr08: 1167522-1168021 Eucalyptus grandis
Eucgr.H00317 0.5kb downstream 0.5kb downstream 9882 true Chr08: 1157640-1167521 Eucalyptus grandis
Eucgr.H00317 0.5kb downstream 0.5kb downstream 500 false Chr08: 1157640-1158139 Eucalyptus grandis
Eucgr.H00317 1.0kb upstream 1.0kb upstream 10382 true Chr08: 1158140-1168521 Eucalyptus grandis
Eucgr.H00317 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1167522-1168521 Eucalyptus grandis
Eucgr.H00317 1.0kb downstream 1.0kb downstream 10382 true Chr08: 1157140-1167521 Eucalyptus grandis
Eucgr.H00317 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1157140-1158139 Eucalyptus grandis
Eucgr.H00317 2.0kb upstream 2.0kb upstream 11382 true Chr08: 1158140-1169521 Eucalyptus grandis
Eucgr.H00317 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1167522-1169521 Eucalyptus grandis
Eucgr.H00317 2.0kb downstream 2.0kb downstream 11382 true Chr08: 1156140-1167521 Eucalyptus grandis
Eucgr.H00317 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1156140-1158139 Eucalyptus grandis
Eucgr.H00317 5.0kb upstream 5.0kb upstream 14382 true Chr08: 1158140-1172521 Eucalyptus grandis
Eucgr.H00317 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1167522-1172521 Eucalyptus grandis
Eucgr.H00317 5.0kb downstream 5.0kb downstream 14382 true Chr08: 1153140-1167521 Eucalyptus grandis
Eucgr.H00317 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1153140-1158139 Eucalyptus grandis
Eucgr.H00317 10.0kb upstream 10.0kb upstream 19382 true Chr08: 1158140-1177521 Eucalyptus grandis
Eucgr.H00317 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1167522-1177521 Eucalyptus grandis
Eucgr.H00317 10.0kb downstream 10.0kb downstream 19382 true Chr08: 1148140-1167521 Eucalyptus grandis
Eucgr.H00317 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1148140-1158139 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85048 0.0 22.2586    
cufflinks 4.4397 0.0 10.3877   Low
cufflinks 9.09459 0.0 20.4663    
cufflinks 4.37604 0.0 10.0859   Low
cufflinks 8.0213 0.0 18.5721    
cufflinks 10.8358 0.0 24.2785    

0 Strain