Gene : Eucgr.H00342 E. grandis v2.0
Defline:  (1 of 1) PTHR14289:SF16 - F-BOX ONLY PROTEIN 3 Genomic Order:  91
Name:  ? Eucgr.H00342 Secondary Identifier:  ? PAC:32041612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00342 0.5kb upstream 0.5kb upstream 5172 true Chr08: 1387936-1393107 Eucalyptus grandis
Eucgr.H00342 0.5kb upstream 0.5kb upstream 500 false Chr08: 1387936-1388435 Eucalyptus grandis
Eucgr.H00342 0.5kb downstream 0.5kb downstream 5172 true Chr08: 1388436-1393607 Eucalyptus grandis
Eucgr.H00342 0.5kb downstream 0.5kb downstream 500 false Chr08: 1393108-1393607 Eucalyptus grandis
Eucgr.H00342 1.0kb upstream 1.0kb upstream 5672 true Chr08: 1387436-1393107 Eucalyptus grandis
Eucgr.H00342 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1387436-1388435 Eucalyptus grandis
Eucgr.H00342 1.0kb downstream 1.0kb downstream 5672 true Chr08: 1388436-1394107 Eucalyptus grandis
Eucgr.H00342 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1393108-1394107 Eucalyptus grandis
Eucgr.H00342 2.0kb upstream 2.0kb upstream 6672 true Chr08: 1386436-1393107 Eucalyptus grandis
Eucgr.H00342 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1386436-1388435 Eucalyptus grandis
Eucgr.H00342 2.0kb downstream 2.0kb downstream 6672 true Chr08: 1388436-1395107 Eucalyptus grandis
Eucgr.H00342 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1393108-1395107 Eucalyptus grandis
Eucgr.H00342 5.0kb upstream 5.0kb upstream 9672 true Chr08: 1383436-1393107 Eucalyptus grandis
Eucgr.H00342 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1383436-1388435 Eucalyptus grandis
Eucgr.H00342 5.0kb downstream 5.0kb downstream 9672 true Chr08: 1388436-1398107 Eucalyptus grandis
Eucgr.H00342 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1393108-1398107 Eucalyptus grandis
Eucgr.H00342 10.0kb upstream 10.0kb upstream 14672 true Chr08: 1378436-1393107 Eucalyptus grandis
Eucgr.H00342 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1378436-1388435 Eucalyptus grandis
Eucgr.H00342 10.0kb downstream 10.0kb downstream 14672 true Chr08: 1388436-1403107 Eucalyptus grandis
Eucgr.H00342 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1393108-1403107 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069195 5270 Rosid View MSA
123748580 5271 Pentapetalae View MSA
122787325 5272 Eudicot View MSA
122044977 5273 Angiosperm View MSA
121344858 5274 Embryophyte View MSA
123425488 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.3037 0.0 98.614 High Low
cufflinks 64.0906 0.0 175.261 High  
cufflinks 34.7156 0.0 94.0877 High  
cufflinks 71.5739 0.0 203.516 High  
cufflinks 84.6365 0.0 227.425 High High
cufflinks 35.1379 0.0 102.567 High  

0 Strain