Gene : Eucgr.H01196 E. grandis v2.0
Defline:  (1 of 1) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  974
Name:  ? Eucgr.H01196 Secondary Identifier:  ? PAC:32042907
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01196 0.5kb upstream 0.5kb upstream 6890 true Chr08: 13757790-13764679 Eucalyptus grandis
Eucgr.H01196 0.5kb upstream 0.5kb upstream 500 false Chr08: 13757790-13758289 Eucalyptus grandis
Eucgr.H01196 0.5kb downstream 0.5kb downstream 6890 true Chr08: 13758290-13765179 Eucalyptus grandis
Eucgr.H01196 0.5kb downstream 0.5kb downstream 500 false Chr08: 13764680-13765179 Eucalyptus grandis
Eucgr.H01196 1.0kb upstream 1.0kb upstream 7390 true Chr08: 13757290-13764679 Eucalyptus grandis
Eucgr.H01196 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13757290-13758289 Eucalyptus grandis
Eucgr.H01196 1.0kb downstream 1.0kb downstream 7390 true Chr08: 13758290-13765679 Eucalyptus grandis
Eucgr.H01196 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13764680-13765679 Eucalyptus grandis
Eucgr.H01196 2.0kb upstream 2.0kb upstream 8390 true Chr08: 13756290-13764679 Eucalyptus grandis
Eucgr.H01196 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13756290-13758289 Eucalyptus grandis
Eucgr.H01196 2.0kb downstream 2.0kb downstream 8390 true Chr08: 13758290-13766679 Eucalyptus grandis
Eucgr.H01196 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13764680-13766679 Eucalyptus grandis
Eucgr.H01196 5.0kb upstream 5.0kb upstream 11390 true Chr08: 13753290-13764679 Eucalyptus grandis
Eucgr.H01196 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13753290-13758289 Eucalyptus grandis
Eucgr.H01196 5.0kb downstream 5.0kb downstream 11390 true Chr08: 13758290-13769679 Eucalyptus grandis
Eucgr.H01196 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13764680-13769679 Eucalyptus grandis
Eucgr.H01196 10.0kb upstream 10.0kb upstream 16390 true Chr08: 13748290-13764679 Eucalyptus grandis
Eucgr.H01196 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13748290-13758289 Eucalyptus grandis
Eucgr.H01196 10.0kb downstream 10.0kb downstream 16390 true Chr08: 13758290-13774679 Eucalyptus grandis
Eucgr.H01196 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13764680-13774679 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067550 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6815 0.0 60.6117   High
cufflinks 15.4294 0.0 34.6559    
cufflinks 23.0525 0.0 51.9739    
cufflinks 10.7456 0.0 24.8827   Low
cufflinks 11.2283 0.0 25.6383   Low
cufflinks 19.7594 0.0 44.3807    

0 Strain