Gene : Eucgr.H01115 E. grandis v2.0
Defline:  (1 of 5) PTHR13166 - PROTEIN C6ORF149 Genomic Order:  902
Name:  ? Eucgr.H01115 Secondary Identifier:  ? PAC:32042486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01115 0.5kb upstream 0.5kb upstream 3068 true Chr08: 12923468-12926535 Eucalyptus grandis
Eucgr.H01115 0.5kb upstream 0.5kb upstream 500 false Chr08: 12926036-12926535 Eucalyptus grandis
Eucgr.H01115 0.5kb downstream 0.5kb downstream 3068 true Chr08: 12922968-12926035 Eucalyptus grandis
Eucgr.H01115 0.5kb downstream 0.5kb downstream 500 false Chr08: 12922968-12923467 Eucalyptus grandis
Eucgr.H01115 1.0kb upstream 1.0kb upstream 3568 true Chr08: 12923468-12927035 Eucalyptus grandis
Eucgr.H01115 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12926036-12927035 Eucalyptus grandis
Eucgr.H01115 1.0kb downstream 1.0kb downstream 3568 true Chr08: 12922468-12926035 Eucalyptus grandis
Eucgr.H01115 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12922468-12923467 Eucalyptus grandis
Eucgr.H01115 2.0kb upstream 2.0kb upstream 4568 true Chr08: 12923468-12928035 Eucalyptus grandis
Eucgr.H01115 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12926036-12928035 Eucalyptus grandis
Eucgr.H01115 2.0kb downstream 2.0kb downstream 4568 true Chr08: 12921468-12926035 Eucalyptus grandis
Eucgr.H01115 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12921468-12923467 Eucalyptus grandis
Eucgr.H01115 5.0kb upstream 5.0kb upstream 7568 true Chr08: 12923468-12931035 Eucalyptus grandis
Eucgr.H01115 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12926036-12931035 Eucalyptus grandis
Eucgr.H01115 5.0kb downstream 5.0kb downstream 7568 true Chr08: 12918468-12926035 Eucalyptus grandis
Eucgr.H01115 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12918468-12923467 Eucalyptus grandis
Eucgr.H01115 10.0kb upstream 10.0kb upstream 12568 true Chr08: 12923468-12936035 Eucalyptus grandis
Eucgr.H01115 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12926036-12936035 Eucalyptus grandis
Eucgr.H01115 10.0kb downstream 10.0kb downstream 12568 true Chr08: 12913468-12926035 Eucalyptus grandis
Eucgr.H01115 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12913468-12923467 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067981 5270 Rosid View MSA
123740582 5271 Pentapetalae View MSA
122787299 5272 Eudicot View MSA
122044477 5273 Angiosperm View MSA
121344831 5274 Embryophyte View MSA
123426412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2025 0.0 52.1454    
cufflinks 4.56689 0.0 12.5585   Low
cufflinks 20.2373 0.0 48.3494    
cufflinks 14.8452 0.0 36.5911    
cufflinks 43.7087 0.0 98.1527 High High
cufflinks 20.8936 0.0 49.246    

0 Strain