Gene : Eucgr.H01106 E. grandis v2.0
Defline:  (1 of 1) PTHR10459//PTHR10459:SF59 - DNA LIGASE Genomic Order:  893
Name:  ? Eucgr.H01106 Secondary Identifier:  ? PAC:32044182
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01106 0.5kb upstream 0.5kb upstream 8837 true Chr08: 12847660-12856496 Eucalyptus grandis
Eucgr.H01106 0.5kb upstream 0.5kb upstream 500 false Chr08: 12847660-12848159 Eucalyptus grandis
Eucgr.H01106 0.5kb downstream 0.5kb downstream 8837 true Chr08: 12848160-12856996 Eucalyptus grandis
Eucgr.H01106 0.5kb downstream 0.5kb downstream 500 false Chr08: 12856497-12856996 Eucalyptus grandis
Eucgr.H01106 1.0kb upstream 1.0kb upstream 9337 true Chr08: 12847160-12856496 Eucalyptus grandis
Eucgr.H01106 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12847160-12848159 Eucalyptus grandis
Eucgr.H01106 1.0kb downstream 1.0kb downstream 9337 true Chr08: 12848160-12857496 Eucalyptus grandis
Eucgr.H01106 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12856497-12857496 Eucalyptus grandis
Eucgr.H01106 2.0kb upstream 2.0kb upstream 10337 true Chr08: 12846160-12856496 Eucalyptus grandis
Eucgr.H01106 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12846160-12848159 Eucalyptus grandis
Eucgr.H01106 2.0kb downstream 2.0kb downstream 10337 true Chr08: 12848160-12858496 Eucalyptus grandis
Eucgr.H01106 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12856497-12858496 Eucalyptus grandis
Eucgr.H01106 5.0kb upstream 5.0kb upstream 13337 true Chr08: 12843160-12856496 Eucalyptus grandis
Eucgr.H01106 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12843160-12848159 Eucalyptus grandis
Eucgr.H01106 5.0kb downstream 5.0kb downstream 13337 true Chr08: 12848160-12861496 Eucalyptus grandis
Eucgr.H01106 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12856497-12861496 Eucalyptus grandis
Eucgr.H01106 10.0kb upstream 10.0kb upstream 18337 true Chr08: 12838160-12856496 Eucalyptus grandis
Eucgr.H01106 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12838160-12848159 Eucalyptus grandis
Eucgr.H01106 10.0kb downstream 10.0kb downstream 18337 true Chr08: 12848160-12866496 Eucalyptus grandis
Eucgr.H01106 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12856497-12866496 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074369 5270 Rosid View MSA
123750076 5271 Pentapetalae View MSA
122797319 5272 Eudicot View MSA
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28645 0.0 5.86211    
cufflinks 1.08494 0.0 2.98348    
cufflinks 2.7372 0.0 6.85687    
cufflinks 0.715775 0.0 2.04374   Low
cufflinks 5.0389 0.0 11.9131   High
cufflinks 2.31145 0.0 5.93419    

0 Strain