Gene : Eucgr.H01055 E. grandis v2.0
Defline:  (1 of 1) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  850
Name:  ? Eucgr.H01055 Secondary Identifier:  ? PAC:32041618
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01055 0.5kb upstream 0.5kb upstream 5940 true Chr08: 12183683-12189622 Eucalyptus grandis
Eucgr.H01055 0.5kb upstream 0.5kb upstream 500 false Chr08: 12183683-12184182 Eucalyptus grandis
Eucgr.H01055 0.5kb downstream 0.5kb downstream 5940 true Chr08: 12184183-12190122 Eucalyptus grandis
Eucgr.H01055 0.5kb downstream 0.5kb downstream 500 false Chr08: 12189623-12190122 Eucalyptus grandis
Eucgr.H01055 1.0kb upstream 1.0kb upstream 6440 true Chr08: 12183183-12189622 Eucalyptus grandis
Eucgr.H01055 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12183183-12184182 Eucalyptus grandis
Eucgr.H01055 1.0kb downstream 1.0kb downstream 6440 true Chr08: 12184183-12190622 Eucalyptus grandis
Eucgr.H01055 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12189623-12190622 Eucalyptus grandis
Eucgr.H01055 2.0kb upstream 2.0kb upstream 7440 true Chr08: 12182183-12189622 Eucalyptus grandis
Eucgr.H01055 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12182183-12184182 Eucalyptus grandis
Eucgr.H01055 2.0kb downstream 2.0kb downstream 7440 true Chr08: 12184183-12191622 Eucalyptus grandis
Eucgr.H01055 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12189623-12191622 Eucalyptus grandis
Eucgr.H01055 5.0kb upstream 5.0kb upstream 10440 true Chr08: 12179183-12189622 Eucalyptus grandis
Eucgr.H01055 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12179183-12184182 Eucalyptus grandis
Eucgr.H01055 5.0kb downstream 5.0kb downstream 10440 true Chr08: 12184183-12194622 Eucalyptus grandis
Eucgr.H01055 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12189623-12194622 Eucalyptus grandis
Eucgr.H01055 10.0kb upstream 10.0kb upstream 15440 true Chr08: 12174183-12189622 Eucalyptus grandis
Eucgr.H01055 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12174183-12184182 Eucalyptus grandis
Eucgr.H01055 10.0kb downstream 10.0kb downstream 15440 true Chr08: 12184183-12199622 Eucalyptus grandis
Eucgr.H01055 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12189623-12199622 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54391 0.0 6.32107    
cufflinks 42.3908 0.0 95.5456 High High
cufflinks 1.99567 0.0 5.13667   Low
cufflinks 46.9814 0.0 106.288 High High
cufflinks 4.12265 0.0 9.81587    
cufflinks 11.0099 0.0 24.4505    

0 Strain