Gene : Eucgr.H01081 E. grandis v2.0
Defline:  (1 of 2) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  870
Name:  ? Eucgr.H01081 Secondary Identifier:  ? PAC:32044277
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01081 0.5kb upstream 0.5kb upstream 7512 true Chr08: 12518828-12526339 Eucalyptus grandis
Eucgr.H01081 0.5kb upstream 0.5kb upstream 500 false Chr08: 12518828-12519327 Eucalyptus grandis
Eucgr.H01081 0.5kb downstream 0.5kb downstream 7512 true Chr08: 12519328-12526839 Eucalyptus grandis
Eucgr.H01081 0.5kb downstream 0.5kb downstream 500 false Chr08: 12526340-12526839 Eucalyptus grandis
Eucgr.H01081 1.0kb upstream 1.0kb upstream 8012 true Chr08: 12518328-12526339 Eucalyptus grandis
Eucgr.H01081 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12518328-12519327 Eucalyptus grandis
Eucgr.H01081 1.0kb downstream 1.0kb downstream 8012 true Chr08: 12519328-12527339 Eucalyptus grandis
Eucgr.H01081 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12526340-12527339 Eucalyptus grandis
Eucgr.H01081 2.0kb upstream 2.0kb upstream 9012 true Chr08: 12517328-12526339 Eucalyptus grandis
Eucgr.H01081 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12517328-12519327 Eucalyptus grandis
Eucgr.H01081 2.0kb downstream 2.0kb downstream 9012 true Chr08: 12519328-12528339 Eucalyptus grandis
Eucgr.H01081 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12526340-12528339 Eucalyptus grandis
Eucgr.H01081 5.0kb upstream 5.0kb upstream 12012 true Chr08: 12514328-12526339 Eucalyptus grandis
Eucgr.H01081 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12514328-12519327 Eucalyptus grandis
Eucgr.H01081 5.0kb downstream 5.0kb downstream 12012 true Chr08: 12519328-12531339 Eucalyptus grandis
Eucgr.H01081 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12526340-12531339 Eucalyptus grandis
Eucgr.H01081 10.0kb upstream 10.0kb upstream 17012 true Chr08: 12509328-12526339 Eucalyptus grandis
Eucgr.H01081 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12509328-12519327 Eucalyptus grandis
Eucgr.H01081 10.0kb downstream 10.0kb downstream 17012 true Chr08: 12519328-12536339 Eucalyptus grandis
Eucgr.H01081 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12526340-12536339 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.3374 0.0 58.2439    
cufflinks 22.5092 0.0 49.7888    
cufflinks 24.4999 0.0 54.181    
cufflinks 25.5027 0.0 56.4035    
cufflinks 14.4805 0.0 32.3306   Low
cufflinks 16.43 0.0 36.5842    

0 Strain