Gene : Eucgr.H00995 E. grandis v2.0
Defline:  (1 of 2) PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED Genomic Order:  794
Name:  ? Eucgr.H00995 Secondary Identifier:  ? PAC:32045576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00995 0.5kb upstream 0.5kb upstream 8877 true Chr08: 11615013-11623889 Eucalyptus grandis
Eucgr.H00995 0.5kb upstream 0.5kb upstream 500 false Chr08: 11615013-11615512 Eucalyptus grandis
Eucgr.H00995 0.5kb downstream 0.5kb downstream 8877 true Chr08: 11615513-11624389 Eucalyptus grandis
Eucgr.H00995 0.5kb downstream 0.5kb downstream 500 false Chr08: 11623890-11624389 Eucalyptus grandis
Eucgr.H00995 1.0kb upstream 1.0kb upstream 9377 true Chr08: 11614513-11623889 Eucalyptus grandis
Eucgr.H00995 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11614513-11615512 Eucalyptus grandis
Eucgr.H00995 1.0kb downstream 1.0kb downstream 9377 true Chr08: 11615513-11624889 Eucalyptus grandis
Eucgr.H00995 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11623890-11624889 Eucalyptus grandis
Eucgr.H00995 2.0kb upstream 2.0kb upstream 10377 true Chr08: 11613513-11623889 Eucalyptus grandis
Eucgr.H00995 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11613513-11615512 Eucalyptus grandis
Eucgr.H00995 2.0kb downstream 2.0kb downstream 10377 true Chr08: 11615513-11625889 Eucalyptus grandis
Eucgr.H00995 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11623890-11625889 Eucalyptus grandis
Eucgr.H00995 5.0kb upstream 5.0kb upstream 13377 true Chr08: 11610513-11623889 Eucalyptus grandis
Eucgr.H00995 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11610513-11615512 Eucalyptus grandis
Eucgr.H00995 5.0kb downstream 5.0kb downstream 13377 true Chr08: 11615513-11628889 Eucalyptus grandis
Eucgr.H00995 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11623890-11628889 Eucalyptus grandis
Eucgr.H00995 10.0kb upstream 10.0kb upstream 18377 true Chr08: 11605513-11623889 Eucalyptus grandis
Eucgr.H00995 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11605513-11615512 Eucalyptus grandis
Eucgr.H00995 10.0kb downstream 10.0kb downstream 18377 true Chr08: 11615513-11633889 Eucalyptus grandis
Eucgr.H00995 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11623890-11633889 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070847 5270 Rosid View MSA
123745901 5271 Pentapetalae View MSA
122794075 5272 Eudicot View MSA
122048371 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349798 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8621 0.0 41.7984    
cufflinks 17.4858 0.0 45.5861   High
cufflinks 17.1752 0.0 48.5086   High
cufflinks 10.4092 0.0 27.2647   Low
cufflinks 12.5374 0.0 35.8373    
cufflinks 10.3271 0.0 24.1205   Low

0 Strain