Gene : Eucgr.H00884 E. grandis v2.0
Defline:  (1 of 7) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  775
Name:  ? Eucgr.H00884 Secondary Identifier:  ? PAC:32042825
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00884 0.5kb upstream 0.5kb upstream 2477 true Chr08: 11251934-11254410 Eucalyptus grandis
Eucgr.H00884 0.5kb upstream 0.5kb upstream 500 false Chr08: 11253911-11254410 Eucalyptus grandis
Eucgr.H00884 0.5kb downstream 0.5kb downstream 2477 true Chr08: 11251434-11253910 Eucalyptus grandis
Eucgr.H00884 0.5kb downstream 0.5kb downstream 500 false Chr08: 11251434-11251933 Eucalyptus grandis
Eucgr.H00884 1.0kb upstream 1.0kb upstream 2977 true Chr08: 11251934-11254910 Eucalyptus grandis
Eucgr.H00884 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11253911-11254910 Eucalyptus grandis
Eucgr.H00884 1.0kb downstream 1.0kb downstream 2977 true Chr08: 11250934-11253910 Eucalyptus grandis
Eucgr.H00884 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11250934-11251933 Eucalyptus grandis
Eucgr.H00884 2.0kb upstream 2.0kb upstream 3977 true Chr08: 11251934-11255910 Eucalyptus grandis
Eucgr.H00884 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11253911-11255910 Eucalyptus grandis
Eucgr.H00884 2.0kb downstream 2.0kb downstream 3977 true Chr08: 11249934-11253910 Eucalyptus grandis
Eucgr.H00884 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11249934-11251933 Eucalyptus grandis
Eucgr.H00884 5.0kb upstream 5.0kb upstream 6977 true Chr08: 11251934-11258910 Eucalyptus grandis
Eucgr.H00884 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11253911-11258910 Eucalyptus grandis
Eucgr.H00884 5.0kb downstream 5.0kb downstream 6977 true Chr08: 11246934-11253910 Eucalyptus grandis
Eucgr.H00884 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11246934-11251933 Eucalyptus grandis
Eucgr.H00884 10.0kb upstream 10.0kb upstream 11977 true Chr08: 11251934-11263910 Eucalyptus grandis
Eucgr.H00884 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11253911-11263910 Eucalyptus grandis
Eucgr.H00884 10.0kb downstream 10.0kb downstream 11977 true Chr08: 11241934-11253910 Eucalyptus grandis
Eucgr.H00884 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11241934-11251933 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062659 5270 Rosid View MSA
123740244 5271 Pentapetalae View MSA
122792271 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7818 0.0 76.9324 High High
cufflinks 1.41213 0.0 3.99936   Low
cufflinks 19.0882 0.0 42.8043    
cufflinks 4.42969 0.0 11.2938    
cufflinks 0.932855 0.0 2.75196   Low
cufflinks 25.2554 0.0 55.8755    

0 Strain