Gene : Eucgr.H00849 E. grandis v2.0
Defline:  (1 of 3) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  745
Name:  ? Eucgr.H00849 Secondary Identifier:  ? PAC:32044426
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ILEUDEG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5910 Eucalyptus grandis pathologic  
Egrandis PWY-922 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00849 0.5kb upstream 0.5kb upstream 4411 true Chr08: 10921131-10925541 Eucalyptus grandis
Eucgr.H00849 0.5kb upstream 0.5kb upstream 500 false Chr08: 10925042-10925541 Eucalyptus grandis
Eucgr.H00849 0.5kb downstream 0.5kb downstream 4411 true Chr08: 10920631-10925041 Eucalyptus grandis
Eucgr.H00849 0.5kb downstream 0.5kb downstream 500 false Chr08: 10920631-10921130 Eucalyptus grandis
Eucgr.H00849 1.0kb upstream 1.0kb upstream 4911 true Chr08: 10921131-10926041 Eucalyptus grandis
Eucgr.H00849 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10925042-10926041 Eucalyptus grandis
Eucgr.H00849 1.0kb downstream 1.0kb downstream 4911 true Chr08: 10920131-10925041 Eucalyptus grandis
Eucgr.H00849 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10920131-10921130 Eucalyptus grandis
Eucgr.H00849 2.0kb upstream 2.0kb upstream 5911 true Chr08: 10921131-10927041 Eucalyptus grandis
Eucgr.H00849 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10925042-10927041 Eucalyptus grandis
Eucgr.H00849 2.0kb downstream 2.0kb downstream 5911 true Chr08: 10919131-10925041 Eucalyptus grandis
Eucgr.H00849 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10919131-10921130 Eucalyptus grandis
Eucgr.H00849 5.0kb upstream 5.0kb upstream 8911 true Chr08: 10921131-10930041 Eucalyptus grandis
Eucgr.H00849 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10925042-10930041 Eucalyptus grandis
Eucgr.H00849 5.0kb downstream 5.0kb downstream 8911 true Chr08: 10916131-10925041 Eucalyptus grandis
Eucgr.H00849 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10916131-10921130 Eucalyptus grandis
Eucgr.H00849 10.0kb upstream 10.0kb upstream 13911 true Chr08: 10921131-10935041 Eucalyptus grandis
Eucgr.H00849 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10925042-10935041 Eucalyptus grandis
Eucgr.H00849 10.0kb downstream 10.0kb downstream 13911 true Chr08: 10911131-10925041 Eucalyptus grandis
Eucgr.H00849 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10911131-10921130 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.5554 0.0 220.255 High  
cufflinks 26.1967 0.0 58.2497   Low
cufflinks 137.484 0.0 318.104 High High
cufflinks 35.6471 0.0 78.8535    
cufflinks 30.6656 0.0 68.0177    
cufflinks 131.407 0.0 300.667 High High

0 Strain