Gene : Eucgr.H00801 E. grandis v2.0
Defline:  (1 of 1) PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN Genomic Order:  703
Name:  ? Eucgr.H00801 Secondary Identifier:  ? PAC:32044953
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00801 0.5kb upstream 0.5kb upstream 9653 true Chr08: 10412630-10422282 Eucalyptus grandis
Eucgr.H00801 0.5kb upstream 0.5kb upstream 500 false Chr08: 10421783-10422282 Eucalyptus grandis
Eucgr.H00801 0.5kb downstream 0.5kb downstream 9653 true Chr08: 10412130-10421782 Eucalyptus grandis
Eucgr.H00801 0.5kb downstream 0.5kb downstream 500 false Chr08: 10412130-10412629 Eucalyptus grandis
Eucgr.H00801 1.0kb upstream 1.0kb upstream 10153 true Chr08: 10412630-10422782 Eucalyptus grandis
Eucgr.H00801 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10421783-10422782 Eucalyptus grandis
Eucgr.H00801 1.0kb downstream 1.0kb downstream 10153 true Chr08: 10411630-10421782 Eucalyptus grandis
Eucgr.H00801 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10411630-10412629 Eucalyptus grandis
Eucgr.H00801 2.0kb upstream 2.0kb upstream 11153 true Chr08: 10412630-10423782 Eucalyptus grandis
Eucgr.H00801 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10421783-10423782 Eucalyptus grandis
Eucgr.H00801 2.0kb downstream 2.0kb downstream 11153 true Chr08: 10410630-10421782 Eucalyptus grandis
Eucgr.H00801 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10410630-10412629 Eucalyptus grandis
Eucgr.H00801 5.0kb upstream 5.0kb upstream 14153 true Chr08: 10412630-10426782 Eucalyptus grandis
Eucgr.H00801 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10421783-10426782 Eucalyptus grandis
Eucgr.H00801 5.0kb downstream 5.0kb downstream 14153 true Chr08: 10407630-10421782 Eucalyptus grandis
Eucgr.H00801 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10407630-10412629 Eucalyptus grandis
Eucgr.H00801 10.0kb upstream 10.0kb upstream 19153 true Chr08: 10412630-10431782 Eucalyptus grandis
Eucgr.H00801 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10421783-10431782 Eucalyptus grandis
Eucgr.H00801 10.0kb downstream 10.0kb downstream 19153 true Chr08: 10402630-10421782 Eucalyptus grandis
Eucgr.H00801 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10402630-10412629 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070895 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.57663 0.0 23.9119    
cufflinks 4.50677 0.0 12.3591    
cufflinks 9.76499 0.0 27.4626   High
cufflinks 4.34963 0.0 12.0923    
cufflinks 3.9374 0.0 11.5135   Low
cufflinks 6.89252 0.0 16.4094    

0 Strain