Gene : Eucgr.H01620 E. grandis v2.0
Defline:  (1 of 8) PTHR11802:SF96 - SERINE CARBOXYPEPTIDASE-LIKE 20-RELATED Genomic Order:  1349
Name:  ? Eucgr.H01620 Secondary Identifier:  ? PAC:32043850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01620 0.5kb upstream 0.5kb upstream 4444 true Chr08: 19102821-19107264 Eucalyptus grandis
Eucgr.H01620 0.5kb upstream 0.5kb upstream 500 false Chr08: 19106765-19107264 Eucalyptus grandis
Eucgr.H01620 0.5kb downstream 0.5kb downstream 4444 true Chr08: 19102321-19106764 Eucalyptus grandis
Eucgr.H01620 0.5kb downstream 0.5kb downstream 500 false Chr08: 19102321-19102820 Eucalyptus grandis
Eucgr.H01620 1.0kb upstream 1.0kb upstream 4944 true Chr08: 19102821-19107764 Eucalyptus grandis
Eucgr.H01620 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19106765-19107764 Eucalyptus grandis
Eucgr.H01620 1.0kb downstream 1.0kb downstream 4944 true Chr08: 19101821-19106764 Eucalyptus grandis
Eucgr.H01620 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19101821-19102820 Eucalyptus grandis
Eucgr.H01620 2.0kb upstream 2.0kb upstream 5944 true Chr08: 19102821-19108764 Eucalyptus grandis
Eucgr.H01620 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19106765-19108764 Eucalyptus grandis
Eucgr.H01620 2.0kb downstream 2.0kb downstream 5944 true Chr08: 19100821-19106764 Eucalyptus grandis
Eucgr.H01620 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19100821-19102820 Eucalyptus grandis
Eucgr.H01620 5.0kb upstream 5.0kb upstream 8944 true Chr08: 19102821-19111764 Eucalyptus grandis
Eucgr.H01620 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19106765-19111764 Eucalyptus grandis
Eucgr.H01620 5.0kb downstream 5.0kb downstream 8944 true Chr08: 19097821-19106764 Eucalyptus grandis
Eucgr.H01620 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19097821-19102820 Eucalyptus grandis
Eucgr.H01620 10.0kb upstream 10.0kb upstream 13944 true Chr08: 19102821-19116764 Eucalyptus grandis
Eucgr.H01620 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19106765-19116764 Eucalyptus grandis
Eucgr.H01620 10.0kb downstream 10.0kb downstream 13944 true Chr08: 19092821-19106764 Eucalyptus grandis
Eucgr.H01620 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19092821-19102820 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075506 5270 Rosid View MSA
123752631 5271 Pentapetalae View MSA
122797203 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3568 0.0 43.1715   High
cufflinks 0.66898 0.0 2.01506 Low Low
cufflinks 15.2132 0.0 34.1887    
cufflinks 1.99778 0.0 5.35454    
cufflinks 5.74328 0.0 13.8954    
cufflinks 9.67107 0.0 22.5714    

0 Strain