Gene : Eucgr.H01429 E. grandis v2.0
Defline:  (1 of 6) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  1176
Name:  ? Eucgr.H01429 Secondary Identifier:  ? PAC:32043224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01429 0.5kb upstream 0.5kb upstream 980 true Chr08: 16972529-16973508 Eucalyptus grandis
Eucgr.H01429 0.5kb upstream 0.5kb upstream 500 false Chr08: 16973009-16973508 Eucalyptus grandis
Eucgr.H01429 0.5kb downstream 0.5kb downstream 980 true Chr08: 16972029-16973008 Eucalyptus grandis
Eucgr.H01429 0.5kb downstream 0.5kb downstream 500 false Chr08: 16972029-16972528 Eucalyptus grandis
Eucgr.H01429 1.0kb upstream 1.0kb upstream 1480 true Chr08: 16972529-16974008 Eucalyptus grandis
Eucgr.H01429 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16973009-16974008 Eucalyptus grandis
Eucgr.H01429 1.0kb downstream 1.0kb downstream 1480 true Chr08: 16971529-16973008 Eucalyptus grandis
Eucgr.H01429 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16971529-16972528 Eucalyptus grandis
Eucgr.H01429 2.0kb upstream 2.0kb upstream 2480 true Chr08: 16972529-16975008 Eucalyptus grandis
Eucgr.H01429 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16973009-16975008 Eucalyptus grandis
Eucgr.H01429 2.0kb downstream 2.0kb downstream 2480 true Chr08: 16970529-16973008 Eucalyptus grandis
Eucgr.H01429 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16970529-16972528 Eucalyptus grandis
Eucgr.H01429 5.0kb upstream 5.0kb upstream 5480 true Chr08: 16972529-16978008 Eucalyptus grandis
Eucgr.H01429 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16973009-16978008 Eucalyptus grandis
Eucgr.H01429 5.0kb downstream 5.0kb downstream 5480 true Chr08: 16967529-16973008 Eucalyptus grandis
Eucgr.H01429 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16967529-16972528 Eucalyptus grandis
Eucgr.H01429 10.0kb upstream 10.0kb upstream 10480 true Chr08: 16972529-16983008 Eucalyptus grandis
Eucgr.H01429 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16973009-16983008 Eucalyptus grandis
Eucgr.H01429 10.0kb downstream 10.0kb downstream 10480 true Chr08: 16962529-16973008 Eucalyptus grandis
Eucgr.H01429 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16962529-16972528 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.90987 0.0 6.50686    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.39669 0.0 13.5992    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain