Gene : Eucgr.H01435 E. grandis v2.0
Defline:  (1 of 6) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  1171
Name:  ? Eucgr.H01435 Secondary Identifier:  ? PAC:32045676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01435 0.5kb upstream 0.5kb upstream 1062 true Chr08: 16911330-16912391 Eucalyptus grandis
Eucgr.H01435 0.5kb upstream 0.5kb upstream 500 false Chr08: 16911892-16912391 Eucalyptus grandis
Eucgr.H01435 0.5kb downstream 0.5kb downstream 1062 true Chr08: 16910830-16911891 Eucalyptus grandis
Eucgr.H01435 0.5kb downstream 0.5kb downstream 500 false Chr08: 16910830-16911329 Eucalyptus grandis
Eucgr.H01435 1.0kb upstream 1.0kb upstream 1562 true Chr08: 16911330-16912891 Eucalyptus grandis
Eucgr.H01435 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16911892-16912891 Eucalyptus grandis
Eucgr.H01435 1.0kb downstream 1.0kb downstream 1562 true Chr08: 16910330-16911891 Eucalyptus grandis
Eucgr.H01435 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16910330-16911329 Eucalyptus grandis
Eucgr.H01435 2.0kb upstream 2.0kb upstream 2562 true Chr08: 16911330-16913891 Eucalyptus grandis
Eucgr.H01435 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16911892-16913891 Eucalyptus grandis
Eucgr.H01435 2.0kb downstream 2.0kb downstream 2562 true Chr08: 16909330-16911891 Eucalyptus grandis
Eucgr.H01435 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16909330-16911329 Eucalyptus grandis
Eucgr.H01435 5.0kb upstream 5.0kb upstream 5562 true Chr08: 16911330-16916891 Eucalyptus grandis
Eucgr.H01435 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16911892-16916891 Eucalyptus grandis
Eucgr.H01435 5.0kb downstream 5.0kb downstream 5562 true Chr08: 16906330-16911891 Eucalyptus grandis
Eucgr.H01435 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16906330-16911329 Eucalyptus grandis
Eucgr.H01435 10.0kb upstream 10.0kb upstream 10562 true Chr08: 16911330-16921891 Eucalyptus grandis
Eucgr.H01435 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16911892-16921891 Eucalyptus grandis
Eucgr.H01435 10.0kb downstream 10.0kb downstream 10562 true Chr08: 16901330-16911891 Eucalyptus grandis
Eucgr.H01435 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16901330-16911329 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32011 0.0 4.49757    
cufflinks 2.1749 0.0 7.002    
cufflinks 0.747858 0.0 2.80337   Low
cufflinks 1.50027 0.0 5.15154    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.873 0.0 11.4509   High

0 Strain