Gene : Eucgr.H02480 E. grandis v2.0
Defline:  (1 of 4) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  1911
Name:  ? Eucgr.H02480 Secondary Identifier:  ? PAC:32042806
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1301 Eucalyptus grandis pathologic  
Egrandis PWY-6527 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02480 0.5kb upstream 0.5kb upstream 5287 true Chr08: 32486987-32492273 Eucalyptus grandis
Eucgr.H02480 0.5kb upstream 0.5kb upstream 500 false Chr08: 32491774-32492273 Eucalyptus grandis
Eucgr.H02480 0.5kb downstream 0.5kb downstream 5287 true Chr08: 32486487-32491773 Eucalyptus grandis
Eucgr.H02480 0.5kb downstream 0.5kb downstream 500 false Chr08: 32486487-32486986 Eucalyptus grandis
Eucgr.H02480 1.0kb upstream 1.0kb upstream 5787 true Chr08: 32486987-32492773 Eucalyptus grandis
Eucgr.H02480 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32491774-32492773 Eucalyptus grandis
Eucgr.H02480 1.0kb downstream 1.0kb downstream 5787 true Chr08: 32485987-32491773 Eucalyptus grandis
Eucgr.H02480 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32485987-32486986 Eucalyptus grandis
Eucgr.H02480 2.0kb upstream 2.0kb upstream 6787 true Chr08: 32486987-32493773 Eucalyptus grandis
Eucgr.H02480 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32491774-32493773 Eucalyptus grandis
Eucgr.H02480 2.0kb downstream 2.0kb downstream 6787 true Chr08: 32484987-32491773 Eucalyptus grandis
Eucgr.H02480 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32484987-32486986 Eucalyptus grandis
Eucgr.H02480 5.0kb upstream 5.0kb upstream 9787 true Chr08: 32486987-32496773 Eucalyptus grandis
Eucgr.H02480 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32491774-32496773 Eucalyptus grandis
Eucgr.H02480 5.0kb downstream 5.0kb downstream 9787 true Chr08: 32481987-32491773 Eucalyptus grandis
Eucgr.H02480 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32481987-32486986 Eucalyptus grandis
Eucgr.H02480 10.0kb upstream 10.0kb upstream 14787 true Chr08: 32486987-32501773 Eucalyptus grandis
Eucgr.H02480 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32491774-32501773 Eucalyptus grandis
Eucgr.H02480 10.0kb downstream 10.0kb downstream 14787 true Chr08: 32476987-32491773 Eucalyptus grandis
Eucgr.H02480 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32476987-32486986 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.61384E-4 0.0 0.0199029 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain