Gene : Eucgr.H02485 E. grandis v2.0
Defline:  (1 of 4) PTHR22835//PTHR22835:SF250 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1916
Name:  ? Eucgr.H02485 Secondary Identifier:  ? PAC:32043893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02485 0.5kb upstream 0.5kb upstream 3277 true Chr08: 32936569-32939845 Eucalyptus grandis
Eucgr.H02485 0.5kb upstream 0.5kb upstream 500 false Chr08: 32936569-32937068 Eucalyptus grandis
Eucgr.H02485 0.5kb downstream 0.5kb downstream 3277 true Chr08: 32937069-32940345 Eucalyptus grandis
Eucgr.H02485 0.5kb downstream 0.5kb downstream 500 false Chr08: 32939846-32940345 Eucalyptus grandis
Eucgr.H02485 1.0kb upstream 1.0kb upstream 3777 true Chr08: 32936069-32939845 Eucalyptus grandis
Eucgr.H02485 1.0kb upstream 1.0kb upstream 1000 false Chr08: 32936069-32937068 Eucalyptus grandis
Eucgr.H02485 1.0kb downstream 1.0kb downstream 3777 true Chr08: 32937069-32940845 Eucalyptus grandis
Eucgr.H02485 1.0kb downstream 1.0kb downstream 1000 false Chr08: 32939846-32940845 Eucalyptus grandis
Eucgr.H02485 2.0kb upstream 2.0kb upstream 4777 true Chr08: 32935069-32939845 Eucalyptus grandis
Eucgr.H02485 2.0kb upstream 2.0kb upstream 2000 false Chr08: 32935069-32937068 Eucalyptus grandis
Eucgr.H02485 2.0kb downstream 2.0kb downstream 4777 true Chr08: 32937069-32941845 Eucalyptus grandis
Eucgr.H02485 2.0kb downstream 2.0kb downstream 2000 false Chr08: 32939846-32941845 Eucalyptus grandis
Eucgr.H02485 5.0kb upstream 5.0kb upstream 7777 true Chr08: 32932069-32939845 Eucalyptus grandis
Eucgr.H02485 5.0kb upstream 5.0kb upstream 5000 false Chr08: 32932069-32937068 Eucalyptus grandis
Eucgr.H02485 5.0kb downstream 5.0kb downstream 7777 true Chr08: 32937069-32944845 Eucalyptus grandis
Eucgr.H02485 5.0kb downstream 5.0kb downstream 5000 false Chr08: 32939846-32944845 Eucalyptus grandis
Eucgr.H02485 10.0kb upstream 10.0kb upstream 12777 true Chr08: 32927069-32939845 Eucalyptus grandis
Eucgr.H02485 10.0kb upstream 10.0kb upstream 10000 false Chr08: 32927069-32937068 Eucalyptus grandis
Eucgr.H02485 10.0kb downstream 10.0kb downstream 12777 true Chr08: 32937069-32949845 Eucalyptus grandis
Eucgr.H02485 10.0kb downstream 10.0kb downstream 10000 false Chr08: 32939846-32949845 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072299 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.72652 0.0 16.2158    
cufflinks 4.9662 0.0 12.3532    
cufflinks 15.8148 0.0 35.7326   High
cufflinks 4.1614 0.0 10.5721    
cufflinks 10.7866 0.0 24.9497    
cufflinks 1.80781 0.0 4.96731   Low

0 Strain