Gene : Eucgr.H02404 E. grandis v2.0
Defline:  (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 Genomic Order:  1847
Name:  ? Eucgr.H02404 Secondary Identifier:  ? PAC:32042505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02404 0.5kb upstream 0.5kb upstream 14629 true Chr08: 31435130-31449758 Eucalyptus grandis
Eucgr.H02404 0.5kb upstream 0.5kb upstream 500 false Chr08: 31435130-31435629 Eucalyptus grandis
Eucgr.H02404 0.5kb downstream 0.5kb downstream 14629 true Chr08: 31435630-31450258 Eucalyptus grandis
Eucgr.H02404 0.5kb downstream 0.5kb downstream 500 false Chr08: 31449759-31450258 Eucalyptus grandis
Eucgr.H02404 1.0kb upstream 1.0kb upstream 15129 true Chr08: 31434630-31449758 Eucalyptus grandis
Eucgr.H02404 1.0kb upstream 1.0kb upstream 1000 false Chr08: 31434630-31435629 Eucalyptus grandis
Eucgr.H02404 1.0kb downstream 1.0kb downstream 15129 true Chr08: 31435630-31450758 Eucalyptus grandis
Eucgr.H02404 1.0kb downstream 1.0kb downstream 1000 false Chr08: 31449759-31450758 Eucalyptus grandis
Eucgr.H02404 2.0kb upstream 2.0kb upstream 16129 true Chr08: 31433630-31449758 Eucalyptus grandis
Eucgr.H02404 2.0kb upstream 2.0kb upstream 2000 false Chr08: 31433630-31435629 Eucalyptus grandis
Eucgr.H02404 2.0kb downstream 2.0kb downstream 16129 true Chr08: 31435630-31451758 Eucalyptus grandis
Eucgr.H02404 2.0kb downstream 2.0kb downstream 2000 false Chr08: 31449759-31451758 Eucalyptus grandis
Eucgr.H02404 5.0kb upstream 5.0kb upstream 19129 true Chr08: 31430630-31449758 Eucalyptus grandis
Eucgr.H02404 5.0kb upstream 5.0kb upstream 5000 false Chr08: 31430630-31435629 Eucalyptus grandis
Eucgr.H02404 5.0kb downstream 5.0kb downstream 19129 true Chr08: 31435630-31454758 Eucalyptus grandis
Eucgr.H02404 5.0kb downstream 5.0kb downstream 5000 false Chr08: 31449759-31454758 Eucalyptus grandis
Eucgr.H02404 10.0kb upstream 10.0kb upstream 24129 true Chr08: 31425630-31449758 Eucalyptus grandis
Eucgr.H02404 10.0kb upstream 10.0kb upstream 10000 false Chr08: 31425630-31435629 Eucalyptus grandis
Eucgr.H02404 10.0kb downstream 10.0kb downstream 24129 true Chr08: 31435630-31459758 Eucalyptus grandis
Eucgr.H02404 10.0kb downstream 10.0kb downstream 10000 false Chr08: 31449759-31459758 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050521 5270 Rosid View MSA
123743587 5271 Pentapetalae View MSA
122794632 5272 Eudicot View MSA
122048922 5273 Angiosperm View MSA
121348222 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11593 0.0 19.8796    
cufflinks 2.56049 0.0 7.06823   Low
cufflinks 9.14911 0.0 21.6146   High
cufflinks 4.44575 0.0 11.8726    
cufflinks 7.15907 0.0 18.6081    
cufflinks 5.36074 0.0 13.3019    

0 Strain