Gene : Eucgr.H02307 E. grandis v2.0
Defline:  (1 of 2) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  1775
Name:  ? Eucgr.H02307 Secondary Identifier:  ? PAC:32043941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02307 0.5kb upstream 0.5kb upstream 3924 true Chr08: 29485900-29489823 Eucalyptus grandis
Eucgr.H02307 0.5kb upstream 0.5kb upstream 500 false Chr08: 29489324-29489823 Eucalyptus grandis
Eucgr.H02307 0.5kb downstream 0.5kb downstream 3924 true Chr08: 29485400-29489323 Eucalyptus grandis
Eucgr.H02307 0.5kb downstream 0.5kb downstream 500 false Chr08: 29485400-29485899 Eucalyptus grandis
Eucgr.H02307 1.0kb upstream 1.0kb upstream 4424 true Chr08: 29485900-29490323 Eucalyptus grandis
Eucgr.H02307 1.0kb upstream 1.0kb upstream 1000 false Chr08: 29489324-29490323 Eucalyptus grandis
Eucgr.H02307 1.0kb downstream 1.0kb downstream 4424 true Chr08: 29484900-29489323 Eucalyptus grandis
Eucgr.H02307 1.0kb downstream 1.0kb downstream 1000 false Chr08: 29484900-29485899 Eucalyptus grandis
Eucgr.H02307 2.0kb upstream 2.0kb upstream 5424 true Chr08: 29485900-29491323 Eucalyptus grandis
Eucgr.H02307 2.0kb upstream 2.0kb upstream 2000 false Chr08: 29489324-29491323 Eucalyptus grandis
Eucgr.H02307 2.0kb downstream 2.0kb downstream 5424 true Chr08: 29483900-29489323 Eucalyptus grandis
Eucgr.H02307 2.0kb downstream 2.0kb downstream 2000 false Chr08: 29483900-29485899 Eucalyptus grandis
Eucgr.H02307 5.0kb upstream 5.0kb upstream 8424 true Chr08: 29485900-29494323 Eucalyptus grandis
Eucgr.H02307 5.0kb upstream 5.0kb upstream 5000 false Chr08: 29489324-29494323 Eucalyptus grandis
Eucgr.H02307 5.0kb downstream 5.0kb downstream 8424 true Chr08: 29480900-29489323 Eucalyptus grandis
Eucgr.H02307 5.0kb downstream 5.0kb downstream 5000 false Chr08: 29480900-29485899 Eucalyptus grandis
Eucgr.H02307 10.0kb upstream 10.0kb upstream 13424 true Chr08: 29485900-29499323 Eucalyptus grandis
Eucgr.H02307 10.0kb upstream 10.0kb upstream 10000 false Chr08: 29489324-29499323 Eucalyptus grandis
Eucgr.H02307 10.0kb downstream 10.0kb downstream 13424 true Chr08: 29475900-29489323 Eucalyptus grandis
Eucgr.H02307 10.0kb downstream 10.0kb downstream 10000 false Chr08: 29475900-29485899 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31849 0.0 8.57912    
cufflinks 27.2521 0.0 60.3128   High
cufflinks 3.62332 0.0 9.25284    
cufflinks 29.6532 0.0 65.5844   High
cufflinks 4.52389 0.0 11.2563    
cufflinks 6.51684 0.0 15.8084    

0 Strain