Gene : Eucgr.H02958 E. grandis v2.0
Defline:  (1 of 6) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  2313
Name:  ? Eucgr.H02958 Secondary Identifier:  ? PAC:32042446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02958 0.5kb upstream 0.5kb upstream 4319 true Chr08: 41769207-41773525 Eucalyptus grandis
Eucgr.H02958 0.5kb upstream 0.5kb upstream 500 false Chr08: 41769207-41769706 Eucalyptus grandis
Eucgr.H02958 0.5kb downstream 0.5kb downstream 4319 true Chr08: 41769707-41774025 Eucalyptus grandis
Eucgr.H02958 0.5kb downstream 0.5kb downstream 500 false Chr08: 41773526-41774025 Eucalyptus grandis
Eucgr.H02958 1.0kb upstream 1.0kb upstream 4819 true Chr08: 41768707-41773525 Eucalyptus grandis
Eucgr.H02958 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41768707-41769706 Eucalyptus grandis
Eucgr.H02958 1.0kb downstream 1.0kb downstream 4819 true Chr08: 41769707-41774525 Eucalyptus grandis
Eucgr.H02958 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41773526-41774525 Eucalyptus grandis
Eucgr.H02958 2.0kb upstream 2.0kb upstream 5819 true Chr08: 41767707-41773525 Eucalyptus grandis
Eucgr.H02958 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41767707-41769706 Eucalyptus grandis
Eucgr.H02958 2.0kb downstream 2.0kb downstream 5819 true Chr08: 41769707-41775525 Eucalyptus grandis
Eucgr.H02958 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41773526-41775525 Eucalyptus grandis
Eucgr.H02958 5.0kb upstream 5.0kb upstream 8819 true Chr08: 41764707-41773525 Eucalyptus grandis
Eucgr.H02958 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41764707-41769706 Eucalyptus grandis
Eucgr.H02958 5.0kb downstream 5.0kb downstream 8819 true Chr08: 41769707-41778525 Eucalyptus grandis
Eucgr.H02958 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41773526-41778525 Eucalyptus grandis
Eucgr.H02958 10.0kb upstream 10.0kb upstream 13819 true Chr08: 41759707-41773525 Eucalyptus grandis
Eucgr.H02958 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41759707-41769706 Eucalyptus grandis
Eucgr.H02958 10.0kb downstream 10.0kb downstream 13819 true Chr08: 41769707-41783525 Eucalyptus grandis
Eucgr.H02958 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41773526-41783525 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124045201 5270 Rosid Singleton cluster - no MSA
123738704 5271 Pentapetalae View MSA
122792480 5272 Eudicot View MSA
122045948 5273 Angiosperm View MSA
121310528 5274 Embryophyte View MSA
123347988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11805 0.0 7.70269    
cufflinks 17.3549 0.0 38.3988   High
cufflinks 1.40374 0.0 3.7437   Low
cufflinks 2.6319 0.0 6.57859    
cufflinks 1.79805 0.0 4.69061    
cufflinks 5.6106 0.0 13.1648    

0 Strain