Gene : Eucgr.H02874 E. grandis v2.0
Defline:  (1 of 1) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  2246
Name:  ? Eucgr.H02874 Secondary Identifier:  ? PAC:32044279
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWYDQC-4 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02874 0.5kb upstream 0.5kb upstream 2518 true Chr08: 40352338-40354855 Eucalyptus grandis
Eucgr.H02874 0.5kb upstream 0.5kb upstream 500 false Chr08: 40354356-40354855 Eucalyptus grandis
Eucgr.H02874 0.5kb downstream 0.5kb downstream 2518 true Chr08: 40351838-40354355 Eucalyptus grandis
Eucgr.H02874 0.5kb downstream 0.5kb downstream 500 false Chr08: 40351838-40352337 Eucalyptus grandis
Eucgr.H02874 1.0kb upstream 1.0kb upstream 3018 true Chr08: 40352338-40355355 Eucalyptus grandis
Eucgr.H02874 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40354356-40355355 Eucalyptus grandis
Eucgr.H02874 1.0kb downstream 1.0kb downstream 3018 true Chr08: 40351338-40354355 Eucalyptus grandis
Eucgr.H02874 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40351338-40352337 Eucalyptus grandis
Eucgr.H02874 2.0kb upstream 2.0kb upstream 4018 true Chr08: 40352338-40356355 Eucalyptus grandis
Eucgr.H02874 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40354356-40356355 Eucalyptus grandis
Eucgr.H02874 2.0kb downstream 2.0kb downstream 4018 true Chr08: 40350338-40354355 Eucalyptus grandis
Eucgr.H02874 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40350338-40352337 Eucalyptus grandis
Eucgr.H02874 5.0kb upstream 5.0kb upstream 7018 true Chr08: 40352338-40359355 Eucalyptus grandis
Eucgr.H02874 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40354356-40359355 Eucalyptus grandis
Eucgr.H02874 5.0kb downstream 5.0kb downstream 7018 true Chr08: 40347338-40354355 Eucalyptus grandis
Eucgr.H02874 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40347338-40352337 Eucalyptus grandis
Eucgr.H02874 10.0kb upstream 10.0kb upstream 12018 true Chr08: 40352338-40364355 Eucalyptus grandis
Eucgr.H02874 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40354356-40364355 Eucalyptus grandis
Eucgr.H02874 10.0kb downstream 10.0kb downstream 12018 true Chr08: 40342338-40354355 Eucalyptus grandis
Eucgr.H02874 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40342338-40352337 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain