Gene : Eucgr.H02788 E. grandis v2.0
Defline:  (1 of 1) PTHR11514:SF61 - TRANSCRIPTION FACTOR FAMA Genomic Order:  2179
Name:  ? Eucgr.H02788 Secondary Identifier:  ? PAC:32041594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02788 0.5kb upstream 0.5kb upstream 2311 true Chr08: 38616412-38618722 Eucalyptus grandis
Eucgr.H02788 0.5kb upstream 0.5kb upstream 500 false Chr08: 38618223-38618722 Eucalyptus grandis
Eucgr.H02788 0.5kb downstream 0.5kb downstream 2311 true Chr08: 38615912-38618222 Eucalyptus grandis
Eucgr.H02788 0.5kb downstream 0.5kb downstream 500 false Chr08: 38615912-38616411 Eucalyptus grandis
Eucgr.H02788 1.0kb upstream 1.0kb upstream 2811 true Chr08: 38616412-38619222 Eucalyptus grandis
Eucgr.H02788 1.0kb upstream 1.0kb upstream 1000 false Chr08: 38618223-38619222 Eucalyptus grandis
Eucgr.H02788 1.0kb downstream 1.0kb downstream 2811 true Chr08: 38615412-38618222 Eucalyptus grandis
Eucgr.H02788 1.0kb downstream 1.0kb downstream 1000 false Chr08: 38615412-38616411 Eucalyptus grandis
Eucgr.H02788 2.0kb upstream 2.0kb upstream 3811 true Chr08: 38616412-38620222 Eucalyptus grandis
Eucgr.H02788 2.0kb upstream 2.0kb upstream 2000 false Chr08: 38618223-38620222 Eucalyptus grandis
Eucgr.H02788 2.0kb downstream 2.0kb downstream 3811 true Chr08: 38614412-38618222 Eucalyptus grandis
Eucgr.H02788 2.0kb downstream 2.0kb downstream 2000 false Chr08: 38614412-38616411 Eucalyptus grandis
Eucgr.H02788 5.0kb upstream 5.0kb upstream 6811 true Chr08: 38616412-38623222 Eucalyptus grandis
Eucgr.H02788 5.0kb upstream 5.0kb upstream 5000 false Chr08: 38618223-38623222 Eucalyptus grandis
Eucgr.H02788 5.0kb downstream 5.0kb downstream 6811 true Chr08: 38611412-38618222 Eucalyptus grandis
Eucgr.H02788 5.0kb downstream 5.0kb downstream 5000 false Chr08: 38611412-38616411 Eucalyptus grandis
Eucgr.H02788 10.0kb upstream 10.0kb upstream 11811 true Chr08: 38616412-38628222 Eucalyptus grandis
Eucgr.H02788 10.0kb upstream 10.0kb upstream 10000 false Chr08: 38618223-38628222 Eucalyptus grandis
Eucgr.H02788 10.0kb downstream 10.0kb downstream 11811 true Chr08: 38606412-38618222 Eucalyptus grandis
Eucgr.H02788 10.0kb downstream 10.0kb downstream 10000 false Chr08: 38606412-38616411 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063220 5270 Rosid View MSA
123749503 5271 Pentapetalae View MSA
122789750 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.34957 0.0 8.91672    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.407582 0.0 1.39216   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.46054 0.0 6.76081    

0 Strain