Gene : Eucgr.H02588 E. grandis v2.0
Defline:  (1 of 2) PF00578//PF13905 - AhpC/TSA family (AhpC-TSA) // Thioredoxin-like (Thioredoxin_8) Genomic Order:  2009
Name:  ? Eucgr.H02588 Secondary Identifier:  ? PAC:32043012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02588 0.5kb upstream 0.5kb upstream 3369 true Chr08: 34811596-34814964 Eucalyptus grandis
Eucgr.H02588 0.5kb upstream 0.5kb upstream 500 false Chr08: 34814465-34814964 Eucalyptus grandis
Eucgr.H02588 0.5kb downstream 0.5kb downstream 3369 true Chr08: 34811096-34814464 Eucalyptus grandis
Eucgr.H02588 0.5kb downstream 0.5kb downstream 500 false Chr08: 34811096-34811595 Eucalyptus grandis
Eucgr.H02588 1.0kb upstream 1.0kb upstream 3869 true Chr08: 34811596-34815464 Eucalyptus grandis
Eucgr.H02588 1.0kb upstream 1.0kb upstream 1000 false Chr08: 34814465-34815464 Eucalyptus grandis
Eucgr.H02588 1.0kb downstream 1.0kb downstream 3869 true Chr08: 34810596-34814464 Eucalyptus grandis
Eucgr.H02588 1.0kb downstream 1.0kb downstream 1000 false Chr08: 34810596-34811595 Eucalyptus grandis
Eucgr.H02588 2.0kb upstream 2.0kb upstream 4869 true Chr08: 34811596-34816464 Eucalyptus grandis
Eucgr.H02588 2.0kb upstream 2.0kb upstream 2000 false Chr08: 34814465-34816464 Eucalyptus grandis
Eucgr.H02588 2.0kb downstream 2.0kb downstream 4869 true Chr08: 34809596-34814464 Eucalyptus grandis
Eucgr.H02588 2.0kb downstream 2.0kb downstream 2000 false Chr08: 34809596-34811595 Eucalyptus grandis
Eucgr.H02588 5.0kb upstream 5.0kb upstream 7869 true Chr08: 34811596-34819464 Eucalyptus grandis
Eucgr.H02588 5.0kb upstream 5.0kb upstream 5000 false Chr08: 34814465-34819464 Eucalyptus grandis
Eucgr.H02588 5.0kb downstream 5.0kb downstream 7869 true Chr08: 34806596-34814464 Eucalyptus grandis
Eucgr.H02588 5.0kb downstream 5.0kb downstream 5000 false Chr08: 34806596-34811595 Eucalyptus grandis
Eucgr.H02588 10.0kb upstream 10.0kb upstream 12869 true Chr08: 34811596-34824464 Eucalyptus grandis
Eucgr.H02588 10.0kb upstream 10.0kb upstream 10000 false Chr08: 34814465-34824464 Eucalyptus grandis
Eucgr.H02588 10.0kb downstream 10.0kb downstream 12869 true Chr08: 34801596-34814464 Eucalyptus grandis
Eucgr.H02588 10.0kb downstream 10.0kb downstream 10000 false Chr08: 34801596-34811595 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065936 5270 Rosid View MSA
123740982 5271 Pentapetalae View MSA
122787214 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.33605 0.0 21.5232    
cufflinks 1.47716 0.0 4.04838    
cufflinks 20.5899 0.0 45.6806   High
cufflinks 0.769934 0.0 2.26078    
cufflinks 0.546547 0.0 1.67629 Low Low
cufflinks 7.0339 0.0 16.6162    

0 Strain