Gene : Eucgr.H03474 E. grandis v2.0
Defline:  (1 of 6) PTHR20863:SF29 - ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  2591
Name:  ? Eucgr.H03474 Secondary Identifier:  ? PAC:32045410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03474 0.5kb upstream 0.5kb upstream 1577 true Chr08: 47557424-47559000 Eucalyptus grandis
Eucgr.H03474 0.5kb upstream 0.5kb upstream 500 false Chr08: 47557424-47557923 Eucalyptus grandis
Eucgr.H03474 0.5kb downstream 0.5kb downstream 1577 true Chr08: 47557924-47559500 Eucalyptus grandis
Eucgr.H03474 0.5kb downstream 0.5kb downstream 500 false Chr08: 47559001-47559500 Eucalyptus grandis
Eucgr.H03474 1.0kb upstream 1.0kb upstream 2077 true Chr08: 47556924-47559000 Eucalyptus grandis
Eucgr.H03474 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47556924-47557923 Eucalyptus grandis
Eucgr.H03474 1.0kb downstream 1.0kb downstream 2077 true Chr08: 47557924-47560000 Eucalyptus grandis
Eucgr.H03474 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47559001-47560000 Eucalyptus grandis
Eucgr.H03474 2.0kb upstream 2.0kb upstream 3077 true Chr08: 47555924-47559000 Eucalyptus grandis
Eucgr.H03474 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47555924-47557923 Eucalyptus grandis
Eucgr.H03474 2.0kb downstream 2.0kb downstream 3077 true Chr08: 47557924-47561000 Eucalyptus grandis
Eucgr.H03474 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47559001-47561000 Eucalyptus grandis
Eucgr.H03474 5.0kb upstream 5.0kb upstream 6077 true Chr08: 47552924-47559000 Eucalyptus grandis
Eucgr.H03474 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47552924-47557923 Eucalyptus grandis
Eucgr.H03474 5.0kb downstream 5.0kb downstream 6077 true Chr08: 47557924-47564000 Eucalyptus grandis
Eucgr.H03474 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47559001-47564000 Eucalyptus grandis
Eucgr.H03474 10.0kb upstream 10.0kb upstream 11077 true Chr08: 47547924-47559000 Eucalyptus grandis
Eucgr.H03474 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47547924-47557923 Eucalyptus grandis
Eucgr.H03474 10.0kb downstream 10.0kb downstream 11077 true Chr08: 47557924-47569000 Eucalyptus grandis
Eucgr.H03474 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47559001-47569000 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.92742 0.0 6.4608    
cufflinks 2.53066 0.0 8.04627    
cufflinks 0.613173 0.0 2.44787    
cufflinks 0.823583 0.0 3.09719    
cufflinks 0.591375 0.0 2.30204 Low Low
cufflinks 3.98551 0.0 12.417   High

0 Strain