Gene : Eucgr.H03416 E. grandis v2.0
Defline:  (1 of 1) PTHR15561 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Genomic Order:  2540
Name:  ? Eucgr.H03416 Secondary Identifier:  ? PAC:32042945
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03416 0.5kb upstream 0.5kb upstream 3985 true Chr08: 46613935-46617919 Eucalyptus grandis
Eucgr.H03416 0.5kb upstream 0.5kb upstream 500 false Chr08: 46617420-46617919 Eucalyptus grandis
Eucgr.H03416 0.5kb downstream 0.5kb downstream 3985 true Chr08: 46613435-46617419 Eucalyptus grandis
Eucgr.H03416 0.5kb downstream 0.5kb downstream 500 false Chr08: 46613435-46613934 Eucalyptus grandis
Eucgr.H03416 1.0kb upstream 1.0kb upstream 4485 true Chr08: 46613935-46618419 Eucalyptus grandis
Eucgr.H03416 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46617420-46618419 Eucalyptus grandis
Eucgr.H03416 1.0kb downstream 1.0kb downstream 4485 true Chr08: 46612935-46617419 Eucalyptus grandis
Eucgr.H03416 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46612935-46613934 Eucalyptus grandis
Eucgr.H03416 2.0kb upstream 2.0kb upstream 5485 true Chr08: 46613935-46619419 Eucalyptus grandis
Eucgr.H03416 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46617420-46619419 Eucalyptus grandis
Eucgr.H03416 2.0kb downstream 2.0kb downstream 5485 true Chr08: 46611935-46617419 Eucalyptus grandis
Eucgr.H03416 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46611935-46613934 Eucalyptus grandis
Eucgr.H03416 5.0kb upstream 5.0kb upstream 8485 true Chr08: 46613935-46622419 Eucalyptus grandis
Eucgr.H03416 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46617420-46622419 Eucalyptus grandis
Eucgr.H03416 5.0kb downstream 5.0kb downstream 8485 true Chr08: 46608935-46617419 Eucalyptus grandis
Eucgr.H03416 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46608935-46613934 Eucalyptus grandis
Eucgr.H03416 10.0kb upstream 10.0kb upstream 13485 true Chr08: 46613935-46627419 Eucalyptus grandis
Eucgr.H03416 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46617420-46627419 Eucalyptus grandis
Eucgr.H03416 10.0kb downstream 10.0kb downstream 13485 true Chr08: 46603935-46617419 Eucalyptus grandis
Eucgr.H03416 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46603935-46613934 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2007 0.0 30.6478   High
cufflinks 9.05037 0.0 21.6884   Low
cufflinks 11.254 0.0 26.5335    
cufflinks 10.8487 0.0 25.6103    
cufflinks 11.692 0.0 27.4679    
cufflinks 11.6342 0.0 27.2985    

0 Strain