Gene : Eucgr.H03043 E. grandis v2.0
Defline:  (1 of 49) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2382
Name:  ? Eucgr.H03043 Secondary Identifier:  ? PAC:32042904
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03043 0.5kb upstream 0.5kb upstream 1711 true Chr08: 43076328-43078038 Eucalyptus grandis
Eucgr.H03043 0.5kb upstream 0.5kb upstream 500 false Chr08: 43076328-43076827 Eucalyptus grandis
Eucgr.H03043 0.5kb downstream 0.5kb downstream 1711 true Chr08: 43076828-43078538 Eucalyptus grandis
Eucgr.H03043 0.5kb downstream 0.5kb downstream 500 false Chr08: 43078039-43078538 Eucalyptus grandis
Eucgr.H03043 1.0kb upstream 1.0kb upstream 2211 true Chr08: 43075828-43078038 Eucalyptus grandis
Eucgr.H03043 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43075828-43076827 Eucalyptus grandis
Eucgr.H03043 1.0kb downstream 1.0kb downstream 2211 true Chr08: 43076828-43079038 Eucalyptus grandis
Eucgr.H03043 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43078039-43079038 Eucalyptus grandis
Eucgr.H03043 2.0kb upstream 2.0kb upstream 3211 true Chr08: 43074828-43078038 Eucalyptus grandis
Eucgr.H03043 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43074828-43076827 Eucalyptus grandis
Eucgr.H03043 2.0kb downstream 2.0kb downstream 3211 true Chr08: 43076828-43080038 Eucalyptus grandis
Eucgr.H03043 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43078039-43080038 Eucalyptus grandis
Eucgr.H03043 5.0kb upstream 5.0kb upstream 6211 true Chr08: 43071828-43078038 Eucalyptus grandis
Eucgr.H03043 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43071828-43076827 Eucalyptus grandis
Eucgr.H03043 5.0kb downstream 5.0kb downstream 6211 true Chr08: 43076828-43083038 Eucalyptus grandis
Eucgr.H03043 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43078039-43083038 Eucalyptus grandis
Eucgr.H03043 10.0kb upstream 10.0kb upstream 11211 true Chr08: 43066828-43078038 Eucalyptus grandis
Eucgr.H03043 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43066828-43076827 Eucalyptus grandis
Eucgr.H03043 10.0kb downstream 10.0kb downstream 11211 true Chr08: 43076828-43088038 Eucalyptus grandis
Eucgr.H03043 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43078039-43088038 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20986 0.0 6.20298    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.51734 0.0 4.43272    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.02611 0.0 12.9902   High
cufflinks 1.39035 0.0 4.11067    

0 Strain