Gene : Eucgr.H02968 E. grandis v2.0
Defline:  (1 of 4) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2323
Name:  ? Eucgr.H02968 Secondary Identifier:  ? PAC:32043983
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4942 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H02968 0.5kb upstream 0.5kb upstream 6849 true Chr08: 41839322-41846170 Eucalyptus grandis
Eucgr.H02968 0.5kb upstream 0.5kb upstream 500 false Chr08: 41845671-41846170 Eucalyptus grandis
Eucgr.H02968 0.5kb downstream 0.5kb downstream 6849 true Chr08: 41838822-41845670 Eucalyptus grandis
Eucgr.H02968 0.5kb downstream 0.5kb downstream 500 false Chr08: 41838822-41839321 Eucalyptus grandis
Eucgr.H02968 1.0kb upstream 1.0kb upstream 7349 true Chr08: 41839322-41846670 Eucalyptus grandis
Eucgr.H02968 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41845671-41846670 Eucalyptus grandis
Eucgr.H02968 1.0kb downstream 1.0kb downstream 7349 true Chr08: 41838322-41845670 Eucalyptus grandis
Eucgr.H02968 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41838322-41839321 Eucalyptus grandis
Eucgr.H02968 2.0kb upstream 2.0kb upstream 8349 true Chr08: 41839322-41847670 Eucalyptus grandis
Eucgr.H02968 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41845671-41847670 Eucalyptus grandis
Eucgr.H02968 2.0kb downstream 2.0kb downstream 8349 true Chr08: 41837322-41845670 Eucalyptus grandis
Eucgr.H02968 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41837322-41839321 Eucalyptus grandis
Eucgr.H02968 5.0kb upstream 5.0kb upstream 11349 true Chr08: 41839322-41850670 Eucalyptus grandis
Eucgr.H02968 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41845671-41850670 Eucalyptus grandis
Eucgr.H02968 5.0kb downstream 5.0kb downstream 11349 true Chr08: 41834322-41845670 Eucalyptus grandis
Eucgr.H02968 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41834322-41839321 Eucalyptus grandis
Eucgr.H02968 10.0kb upstream 10.0kb upstream 16349 true Chr08: 41839322-41855670 Eucalyptus grandis
Eucgr.H02968 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41845671-41855670 Eucalyptus grandis
Eucgr.H02968 10.0kb downstream 10.0kb downstream 16349 true Chr08: 41829322-41845670 Eucalyptus grandis
Eucgr.H02968 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41829322-41839321 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0908134 0.0 0.339575 Low  
cufflinks 5.10961 0.0 11.9976    
cufflinks 0.0430186 0.0 0.194449 Low Low
cufflinks 5.21471 0.0 12.2096    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain