Gene : Eucgr.H04095 E. grandis v2.0
Defline:  (1 of 1) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  3089
Name:  ? Eucgr.H04095 Secondary Identifier:  ? PAC:32043881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04095 0.5kb upstream 0.5kb upstream 9552 true Chr08: 55539749-55549300 Eucalyptus grandis
Eucgr.H04095 0.5kb upstream 0.5kb upstream 500 false Chr08: 55548801-55549300 Eucalyptus grandis
Eucgr.H04095 0.5kb downstream 0.5kb downstream 9552 true Chr08: 55539249-55548800 Eucalyptus grandis
Eucgr.H04095 0.5kb downstream 0.5kb downstream 500 false Chr08: 55539249-55539748 Eucalyptus grandis
Eucgr.H04095 1.0kb upstream 1.0kb upstream 10052 true Chr08: 55539749-55549800 Eucalyptus grandis
Eucgr.H04095 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55548801-55549800 Eucalyptus grandis
Eucgr.H04095 1.0kb downstream 1.0kb downstream 10052 true Chr08: 55538749-55548800 Eucalyptus grandis
Eucgr.H04095 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55538749-55539748 Eucalyptus grandis
Eucgr.H04095 2.0kb upstream 2.0kb upstream 11052 true Chr08: 55539749-55550800 Eucalyptus grandis
Eucgr.H04095 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55548801-55550800 Eucalyptus grandis
Eucgr.H04095 2.0kb downstream 2.0kb downstream 11052 true Chr08: 55537749-55548800 Eucalyptus grandis
Eucgr.H04095 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55537749-55539748 Eucalyptus grandis
Eucgr.H04095 5.0kb upstream 5.0kb upstream 14052 true Chr08: 55539749-55553800 Eucalyptus grandis
Eucgr.H04095 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55548801-55553800 Eucalyptus grandis
Eucgr.H04095 5.0kb downstream 5.0kb downstream 14052 true Chr08: 55534749-55548800 Eucalyptus grandis
Eucgr.H04095 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55534749-55539748 Eucalyptus grandis
Eucgr.H04095 10.0kb upstream 10.0kb upstream 19052 true Chr08: 55539749-55558800 Eucalyptus grandis
Eucgr.H04095 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55548801-55558800 Eucalyptus grandis
Eucgr.H04095 10.0kb downstream 10.0kb downstream 19052 true Chr08: 55529749-55548800 Eucalyptus grandis
Eucgr.H04095 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55529749-55539748 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5417 0.0 61.318    
cufflinks 22.6304 0.0 60.2208    
cufflinks 24.8682 0.0 73.1459   High
cufflinks 19.5161 0.0 56.5022    
cufflinks 21.6048 0.0 61.7931    
cufflinks 15.6594 0.0 45.4274   Low

0 Strain