Gene : Eucgr.H04046 E. grandis v2.0
Defline:  (1 of 2) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Genomic Order:  3042
Name:  ? Eucgr.H04046 Secondary Identifier:  ? PAC:32045333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04046 0.5kb upstream 0.5kb upstream 7931 true Chr08: 54959379-54967309 Eucalyptus grandis
Eucgr.H04046 0.5kb upstream 0.5kb upstream 500 false Chr08: 54959379-54959878 Eucalyptus grandis
Eucgr.H04046 0.5kb downstream 0.5kb downstream 7931 true Chr08: 54959879-54967809 Eucalyptus grandis
Eucgr.H04046 0.5kb downstream 0.5kb downstream 500 false Chr08: 54967310-54967809 Eucalyptus grandis
Eucgr.H04046 1.0kb upstream 1.0kb upstream 8431 true Chr08: 54958879-54967309 Eucalyptus grandis
Eucgr.H04046 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54958879-54959878 Eucalyptus grandis
Eucgr.H04046 1.0kb downstream 1.0kb downstream 8431 true Chr08: 54959879-54968309 Eucalyptus grandis
Eucgr.H04046 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54967310-54968309 Eucalyptus grandis
Eucgr.H04046 2.0kb upstream 2.0kb upstream 9431 true Chr08: 54957879-54967309 Eucalyptus grandis
Eucgr.H04046 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54957879-54959878 Eucalyptus grandis
Eucgr.H04046 2.0kb downstream 2.0kb downstream 9431 true Chr08: 54959879-54969309 Eucalyptus grandis
Eucgr.H04046 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54967310-54969309 Eucalyptus grandis
Eucgr.H04046 5.0kb upstream 5.0kb upstream 12431 true Chr08: 54954879-54967309 Eucalyptus grandis
Eucgr.H04046 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54954879-54959878 Eucalyptus grandis
Eucgr.H04046 5.0kb downstream 5.0kb downstream 12431 true Chr08: 54959879-54972309 Eucalyptus grandis
Eucgr.H04046 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54967310-54972309 Eucalyptus grandis
Eucgr.H04046 10.0kb upstream 10.0kb upstream 17431 true Chr08: 54949879-54967309 Eucalyptus grandis
Eucgr.H04046 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54949879-54959878 Eucalyptus grandis
Eucgr.H04046 10.0kb downstream 10.0kb downstream 17431 true Chr08: 54959879-54977309 Eucalyptus grandis
Eucgr.H04046 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54967310-54977309 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3821 0.0 33.6186   High
cufflinks 8.99821 0.0 21.7977    
cufflinks 12.3102 0.0 33.0159    
cufflinks 6.59344 0.0 16.9487   Low
cufflinks 7.99842 0.0 20.5566    
cufflinks 10.7013 0.0 24.1819    

0 Strain