Gene : Eucgr.H04029 E. grandis v2.0
Defline:  (1 of 1) PTHR12947:SF4 - REGULATOR OF FREE UBIQUITIN CHAINS 1 Genomic Order:  3025
Name:  ? Eucgr.H04029 Secondary Identifier:  ? PAC:32042374
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04029 0.5kb upstream 0.5kb upstream 7551 true Chr08: 54785942-54793492 Eucalyptus grandis
Eucgr.H04029 0.5kb upstream 0.5kb upstream 500 false Chr08: 54792993-54793492 Eucalyptus grandis
Eucgr.H04029 0.5kb downstream 0.5kb downstream 7551 true Chr08: 54785442-54792992 Eucalyptus grandis
Eucgr.H04029 0.5kb downstream 0.5kb downstream 500 false Chr08: 54785442-54785941 Eucalyptus grandis
Eucgr.H04029 1.0kb upstream 1.0kb upstream 8051 true Chr08: 54785942-54793992 Eucalyptus grandis
Eucgr.H04029 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54792993-54793992 Eucalyptus grandis
Eucgr.H04029 1.0kb downstream 1.0kb downstream 8051 true Chr08: 54784942-54792992 Eucalyptus grandis
Eucgr.H04029 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54784942-54785941 Eucalyptus grandis
Eucgr.H04029 2.0kb upstream 2.0kb upstream 9051 true Chr08: 54785942-54794992 Eucalyptus grandis
Eucgr.H04029 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54792993-54794992 Eucalyptus grandis
Eucgr.H04029 2.0kb downstream 2.0kb downstream 9051 true Chr08: 54783942-54792992 Eucalyptus grandis
Eucgr.H04029 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54783942-54785941 Eucalyptus grandis
Eucgr.H04029 5.0kb upstream 5.0kb upstream 12051 true Chr08: 54785942-54797992 Eucalyptus grandis
Eucgr.H04029 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54792993-54797992 Eucalyptus grandis
Eucgr.H04029 5.0kb downstream 5.0kb downstream 12051 true Chr08: 54780942-54792992 Eucalyptus grandis
Eucgr.H04029 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54780942-54785941 Eucalyptus grandis
Eucgr.H04029 10.0kb upstream 10.0kb upstream 17051 true Chr08: 54785942-54802992 Eucalyptus grandis
Eucgr.H04029 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54792993-54802992 Eucalyptus grandis
Eucgr.H04029 10.0kb downstream 10.0kb downstream 17051 true Chr08: 54775942-54792992 Eucalyptus grandis
Eucgr.H04029 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54775942-54785941 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061741 5270 Rosid View MSA
123740701 5271 Pentapetalae View MSA
122792659 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1757 0.0 23.5608    
cufflinks 15.1875 0.0 39.5567    
cufflinks 11.6664 0.0 29.8887    
cufflinks 21.4185 0.0 62.9858   High
cufflinks 8.26087 0.0 23.7334   Low
cufflinks 13.3103 0.0 30.5487    

0 Strain