Gene : Eucgr.H03935 E. grandis v2.0
Defline:  (1 of 1) PTHR19923 - WD40 REPEAT PROTEINPRL1/PRL2-RELATED Genomic Order:  2939
Name:  ? Eucgr.H03935 Secondary Identifier:  ? PAC:32044869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03935 0.5kb upstream 0.5kb upstream 8675 true Chr08: 53871453-53880127 Eucalyptus grandis
Eucgr.H03935 0.5kb upstream 0.5kb upstream 500 false Chr08: 53871453-53871952 Eucalyptus grandis
Eucgr.H03935 0.5kb downstream 0.5kb downstream 8675 true Chr08: 53871953-53880627 Eucalyptus grandis
Eucgr.H03935 0.5kb downstream 0.5kb downstream 500 false Chr08: 53880128-53880627 Eucalyptus grandis
Eucgr.H03935 1.0kb upstream 1.0kb upstream 9175 true Chr08: 53870953-53880127 Eucalyptus grandis
Eucgr.H03935 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53870953-53871952 Eucalyptus grandis
Eucgr.H03935 1.0kb downstream 1.0kb downstream 9175 true Chr08: 53871953-53881127 Eucalyptus grandis
Eucgr.H03935 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53880128-53881127 Eucalyptus grandis
Eucgr.H03935 2.0kb upstream 2.0kb upstream 10175 true Chr08: 53869953-53880127 Eucalyptus grandis
Eucgr.H03935 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53869953-53871952 Eucalyptus grandis
Eucgr.H03935 2.0kb downstream 2.0kb downstream 10175 true Chr08: 53871953-53882127 Eucalyptus grandis
Eucgr.H03935 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53880128-53882127 Eucalyptus grandis
Eucgr.H03935 5.0kb upstream 5.0kb upstream 13175 true Chr08: 53866953-53880127 Eucalyptus grandis
Eucgr.H03935 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53866953-53871952 Eucalyptus grandis
Eucgr.H03935 5.0kb downstream 5.0kb downstream 13175 true Chr08: 53871953-53885127 Eucalyptus grandis
Eucgr.H03935 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53880128-53885127 Eucalyptus grandis
Eucgr.H03935 10.0kb upstream 10.0kb upstream 18175 true Chr08: 53861953-53880127 Eucalyptus grandis
Eucgr.H03935 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53861953-53871952 Eucalyptus grandis
Eucgr.H03935 10.0kb downstream 10.0kb downstream 18175 true Chr08: 53871953-53890127 Eucalyptus grandis
Eucgr.H03935 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53880128-53890127 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068732 5270 Rosid View MSA
123753307 5271 Pentapetalae View MSA
122797815 5272 Eudicot View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.712 0.0 59.0856    
cufflinks 18.4698 0.0 40.9273   Low
cufflinks 30.1909 0.0 66.8662 High High
cufflinks 24.5646 0.0 54.3256    
cufflinks 21.1018 0.0 46.6861    
cufflinks 23.8026 0.0 52.6419    

0 Strain