Gene : Eucgr.H03572 E. grandis v2.0
Defline:  (1 of 1) KOG2015 - NEDD8-activating complex, catalytic component UBA3 Genomic Order:  2665
Name:  ? Eucgr.H03572 Secondary Identifier:  ? PAC:32041870
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03572 0.5kb upstream 0.5kb upstream 6790 true Chr08: 49292933-49299722 Eucalyptus grandis
Eucgr.H03572 0.5kb upstream 0.5kb upstream 500 false Chr08: 49299223-49299722 Eucalyptus grandis
Eucgr.H03572 0.5kb downstream 0.5kb downstream 6790 true Chr08: 49292433-49299222 Eucalyptus grandis
Eucgr.H03572 0.5kb downstream 0.5kb downstream 500 false Chr08: 49292433-49292932 Eucalyptus grandis
Eucgr.H03572 1.0kb upstream 1.0kb upstream 7290 true Chr08: 49292933-49300222 Eucalyptus grandis
Eucgr.H03572 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49299223-49300222 Eucalyptus grandis
Eucgr.H03572 1.0kb downstream 1.0kb downstream 7290 true Chr08: 49291933-49299222 Eucalyptus grandis
Eucgr.H03572 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49291933-49292932 Eucalyptus grandis
Eucgr.H03572 2.0kb upstream 2.0kb upstream 8290 true Chr08: 49292933-49301222 Eucalyptus grandis
Eucgr.H03572 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49299223-49301222 Eucalyptus grandis
Eucgr.H03572 2.0kb downstream 2.0kb downstream 8290 true Chr08: 49290933-49299222 Eucalyptus grandis
Eucgr.H03572 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49290933-49292932 Eucalyptus grandis
Eucgr.H03572 5.0kb upstream 5.0kb upstream 11290 true Chr08: 49292933-49304222 Eucalyptus grandis
Eucgr.H03572 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49299223-49304222 Eucalyptus grandis
Eucgr.H03572 5.0kb downstream 5.0kb downstream 11290 true Chr08: 49287933-49299222 Eucalyptus grandis
Eucgr.H03572 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49287933-49292932 Eucalyptus grandis
Eucgr.H03572 10.0kb upstream 10.0kb upstream 16290 true Chr08: 49292933-49309222 Eucalyptus grandis
Eucgr.H03572 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49299223-49309222 Eucalyptus grandis
Eucgr.H03572 10.0kb downstream 10.0kb downstream 16290 true Chr08: 49282933-49299222 Eucalyptus grandis
Eucgr.H03572 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49282933-49292932 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063511 5270 Rosid View MSA
123743398 5271 Pentapetalae View MSA
122788889 5272 Eudicot View MSA
122047058 5273 Angiosperm View MSA
121346595 5274 Embryophyte View MSA
123424978 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2877 0.0 29.7783    
cufflinks 10.3651 0.0 23.4797   Low
cufflinks 16.4013 0.0 36.4757    
cufflinks 18.1788 0.0 40.3045   High
cufflinks 16.3441 0.0 36.3513    
cufflinks 14.2572 0.0 31.8939    

0 Strain