Gene : Eucgr.H03599 E. grandis v2.0
Defline:  (1 of 12) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Genomic Order:  2687
Name:  ? Eucgr.H03599 Secondary Identifier:  ? PAC:32040727
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03599 0.5kb upstream 0.5kb upstream 7934 true Chr08: 49662622-49670555 Eucalyptus grandis
Eucgr.H03599 0.5kb upstream 0.5kb upstream 500 false Chr08: 49670056-49670555 Eucalyptus grandis
Eucgr.H03599 0.5kb downstream 0.5kb downstream 7934 true Chr08: 49662122-49670055 Eucalyptus grandis
Eucgr.H03599 0.5kb downstream 0.5kb downstream 500 false Chr08: 49662122-49662621 Eucalyptus grandis
Eucgr.H03599 1.0kb upstream 1.0kb upstream 8434 true Chr08: 49662622-49671055 Eucalyptus grandis
Eucgr.H03599 1.0kb upstream 1.0kb upstream 1000 false Chr08: 49670056-49671055 Eucalyptus grandis
Eucgr.H03599 1.0kb downstream 1.0kb downstream 8434 true Chr08: 49661622-49670055 Eucalyptus grandis
Eucgr.H03599 1.0kb downstream 1.0kb downstream 1000 false Chr08: 49661622-49662621 Eucalyptus grandis
Eucgr.H03599 2.0kb upstream 2.0kb upstream 9434 true Chr08: 49662622-49672055 Eucalyptus grandis
Eucgr.H03599 2.0kb upstream 2.0kb upstream 2000 false Chr08: 49670056-49672055 Eucalyptus grandis
Eucgr.H03599 2.0kb downstream 2.0kb downstream 9434 true Chr08: 49660622-49670055 Eucalyptus grandis
Eucgr.H03599 2.0kb downstream 2.0kb downstream 2000 false Chr08: 49660622-49662621 Eucalyptus grandis
Eucgr.H03599 5.0kb upstream 5.0kb upstream 12434 true Chr08: 49662622-49675055 Eucalyptus grandis
Eucgr.H03599 5.0kb upstream 5.0kb upstream 5000 false Chr08: 49670056-49675055 Eucalyptus grandis
Eucgr.H03599 5.0kb downstream 5.0kb downstream 12434 true Chr08: 49657622-49670055 Eucalyptus grandis
Eucgr.H03599 5.0kb downstream 5.0kb downstream 5000 false Chr08: 49657622-49662621 Eucalyptus grandis
Eucgr.H03599 10.0kb upstream 10.0kb upstream 17434 true Chr08: 49662622-49680055 Eucalyptus grandis
Eucgr.H03599 10.0kb upstream 10.0kb upstream 10000 false Chr08: 49670056-49680055 Eucalyptus grandis
Eucgr.H03599 10.0kb downstream 10.0kb downstream 17434 true Chr08: 49652622-49670055 Eucalyptus grandis
Eucgr.H03599 10.0kb downstream 10.0kb downstream 10000 false Chr08: 49652622-49662621 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5798 0.0 50.4619    
cufflinks 36.436 0.0 80.6079   High
cufflinks 19.1675 0.0 43.1812    
cufflinks 40.7283 0.0 90.068 High High
cufflinks 20.1181 0.0 45.1774    
cufflinks 23.8315 0.0 53.2077    

0 Strain