Gene : Eucgr.H04468 E. grandis v2.0
Defline:  (1 of 2) PTHR11969:SF26 - TRANSCRIPTION FACTOR BHLH99 Genomic Order:  3394
Name:  ? Eucgr.H04468 Secondary Identifier:  ? PAC:32043228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04468 0.5kb upstream 0.5kb upstream 2782 true Chr08: 60598278-60601059 Eucalyptus grandis
Eucgr.H04468 0.5kb upstream 0.5kb upstream 500 false Chr08: 60600560-60601059 Eucalyptus grandis
Eucgr.H04468 0.5kb downstream 0.5kb downstream 2782 true Chr08: 60597778-60600559 Eucalyptus grandis
Eucgr.H04468 0.5kb downstream 0.5kb downstream 500 false Chr08: 60597778-60598277 Eucalyptus grandis
Eucgr.H04468 1.0kb upstream 1.0kb upstream 3282 true Chr08: 60598278-60601559 Eucalyptus grandis
Eucgr.H04468 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60600560-60601559 Eucalyptus grandis
Eucgr.H04468 1.0kb downstream 1.0kb downstream 3282 true Chr08: 60597278-60600559 Eucalyptus grandis
Eucgr.H04468 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60597278-60598277 Eucalyptus grandis
Eucgr.H04468 2.0kb upstream 2.0kb upstream 4282 true Chr08: 60598278-60602559 Eucalyptus grandis
Eucgr.H04468 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60600560-60602559 Eucalyptus grandis
Eucgr.H04468 2.0kb downstream 2.0kb downstream 4282 true Chr08: 60596278-60600559 Eucalyptus grandis
Eucgr.H04468 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60596278-60598277 Eucalyptus grandis
Eucgr.H04468 5.0kb upstream 5.0kb upstream 7282 true Chr08: 60598278-60605559 Eucalyptus grandis
Eucgr.H04468 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60600560-60605559 Eucalyptus grandis
Eucgr.H04468 5.0kb downstream 5.0kb downstream 7282 true Chr08: 60593278-60600559 Eucalyptus grandis
Eucgr.H04468 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60593278-60598277 Eucalyptus grandis
Eucgr.H04468 10.0kb upstream 10.0kb upstream 12282 true Chr08: 60598278-60610559 Eucalyptus grandis
Eucgr.H04468 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60600560-60610559 Eucalyptus grandis
Eucgr.H04468 10.0kb downstream 10.0kb downstream 12282 true Chr08: 60588278-60600559 Eucalyptus grandis
Eucgr.H04468 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60588278-60598277 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.0934 0.0 82.1563 High  
cufflinks 26.1222 0.0 57.8097    
cufflinks 23.5481 0.0 52.1546    
cufflinks 22.9028 0.0 50.7304    
cufflinks 39.0391 0.0 86.5765 High High
cufflinks 11.484 0.0 26.1253   Low

0 Strain