Gene : Eucgr.H04399 E. grandis v2.0
Defline:  (1 of 2) PTHR10887:SF362 - RNA HELICASE SDE3-RELATED Genomic Order:  3334
Name:  ? Eucgr.H04399 Secondary Identifier:  ? PAC:32041636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04399 0.5kb upstream 0.5kb upstream 4794 true Chr08: 59785966-59790759 Eucalyptus grandis
Eucgr.H04399 0.5kb upstream 0.5kb upstream 500 false Chr08: 59790260-59790759 Eucalyptus grandis
Eucgr.H04399 0.5kb downstream 0.5kb downstream 4794 true Chr08: 59785466-59790259 Eucalyptus grandis
Eucgr.H04399 0.5kb downstream 0.5kb downstream 500 false Chr08: 59785466-59785965 Eucalyptus grandis
Eucgr.H04399 1.0kb upstream 1.0kb upstream 5294 true Chr08: 59785966-59791259 Eucalyptus grandis
Eucgr.H04399 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59790260-59791259 Eucalyptus grandis
Eucgr.H04399 1.0kb downstream 1.0kb downstream 5294 true Chr08: 59784966-59790259 Eucalyptus grandis
Eucgr.H04399 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59784966-59785965 Eucalyptus grandis
Eucgr.H04399 2.0kb upstream 2.0kb upstream 6294 true Chr08: 59785966-59792259 Eucalyptus grandis
Eucgr.H04399 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59790260-59792259 Eucalyptus grandis
Eucgr.H04399 2.0kb downstream 2.0kb downstream 6294 true Chr08: 59783966-59790259 Eucalyptus grandis
Eucgr.H04399 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59783966-59785965 Eucalyptus grandis
Eucgr.H04399 5.0kb upstream 5.0kb upstream 9294 true Chr08: 59785966-59795259 Eucalyptus grandis
Eucgr.H04399 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59790260-59795259 Eucalyptus grandis
Eucgr.H04399 5.0kb downstream 5.0kb downstream 9294 true Chr08: 59780966-59790259 Eucalyptus grandis
Eucgr.H04399 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59780966-59785965 Eucalyptus grandis
Eucgr.H04399 10.0kb upstream 10.0kb upstream 14294 true Chr08: 59785966-59800259 Eucalyptus grandis
Eucgr.H04399 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59790260-59800259 Eucalyptus grandis
Eucgr.H04399 10.0kb downstream 10.0kb downstream 14294 true Chr08: 59775966-59790259 Eucalyptus grandis
Eucgr.H04399 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59775966-59785965 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064664 5270 Rosid View MSA
123747903 5271 Pentapetalae View MSA
122786159 5272 Eudicot View MSA
122043025 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348159 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.97353 0.0 11.6329    
cufflinks 1.32887 0.0 3.51137   Low
cufflinks 5.7953 0.0 13.355   High
cufflinks 1.09688 0.0 2.95399   Low
cufflinks 2.52616 0.0 6.28559    
cufflinks 3.02439 0.0 7.45058    

0 Strain