Gene : Eucgr.H04159 E. grandis v2.0
Defline:  (1 of 2) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  3144
Name:  ? Eucgr.H04159 Secondary Identifier:  ? PAC:32040864
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04159 0.5kb upstream 0.5kb upstream 2579 true Chr08: 56141857-56144435 Eucalyptus grandis
Eucgr.H04159 0.5kb upstream 0.5kb upstream 500 false Chr08: 56143936-56144435 Eucalyptus grandis
Eucgr.H04159 0.5kb downstream 0.5kb downstream 2579 true Chr08: 56141357-56143935 Eucalyptus grandis
Eucgr.H04159 0.5kb downstream 0.5kb downstream 500 false Chr08: 56141357-56141856 Eucalyptus grandis
Eucgr.H04159 1.0kb upstream 1.0kb upstream 3079 true Chr08: 56141857-56144935 Eucalyptus grandis
Eucgr.H04159 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56143936-56144935 Eucalyptus grandis
Eucgr.H04159 1.0kb downstream 1.0kb downstream 3079 true Chr08: 56140857-56143935 Eucalyptus grandis
Eucgr.H04159 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56140857-56141856 Eucalyptus grandis
Eucgr.H04159 2.0kb upstream 2.0kb upstream 4079 true Chr08: 56141857-56145935 Eucalyptus grandis
Eucgr.H04159 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56143936-56145935 Eucalyptus grandis
Eucgr.H04159 2.0kb downstream 2.0kb downstream 4079 true Chr08: 56139857-56143935 Eucalyptus grandis
Eucgr.H04159 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56139857-56141856 Eucalyptus grandis
Eucgr.H04159 5.0kb upstream 5.0kb upstream 7079 true Chr08: 56141857-56148935 Eucalyptus grandis
Eucgr.H04159 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56143936-56148935 Eucalyptus grandis
Eucgr.H04159 5.0kb downstream 5.0kb downstream 7079 true Chr08: 56136857-56143935 Eucalyptus grandis
Eucgr.H04159 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56136857-56141856 Eucalyptus grandis
Eucgr.H04159 10.0kb upstream 10.0kb upstream 12079 true Chr08: 56141857-56153935 Eucalyptus grandis
Eucgr.H04159 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56143936-56153935 Eucalyptus grandis
Eucgr.H04159 10.0kb downstream 10.0kb downstream 12079 true Chr08: 56131857-56143935 Eucalyptus grandis
Eucgr.H04159 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56131857-56141856 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029123 5273 Angiosperm View MSA
124052013 5270 Rosid View MSA
123752685 5271 Pentapetalae View MSA
122797795 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.485975 0.0 1.56855 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.23773 0.0 0.844207 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain