Gene : Eucgr.H04941 E. grandis v2.0
Defline:  (1 of 2) PTHR14413 - RIBOSOMAL PROTEIN L17 Genomic Order:  3910
Name:  ? Eucgr.H04941 Secondary Identifier:  ? PAC:32044196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04941 0.5kb upstream 0.5kb upstream 4264 true Chr08: 68795364-68799627 Eucalyptus grandis
Eucgr.H04941 0.5kb upstream 0.5kb upstream 500 false Chr08: 68795364-68795863 Eucalyptus grandis
Eucgr.H04941 0.5kb downstream 0.5kb downstream 4264 true Chr08: 68795864-68800127 Eucalyptus grandis
Eucgr.H04941 0.5kb downstream 0.5kb downstream 500 false Chr08: 68799628-68800127 Eucalyptus grandis
Eucgr.H04941 1.0kb upstream 1.0kb upstream 4764 true Chr08: 68794864-68799627 Eucalyptus grandis
Eucgr.H04941 1.0kb upstream 1.0kb upstream 1000 false Chr08: 68794864-68795863 Eucalyptus grandis
Eucgr.H04941 1.0kb downstream 1.0kb downstream 4764 true Chr08: 68795864-68800627 Eucalyptus grandis
Eucgr.H04941 1.0kb downstream 1.0kb downstream 1000 false Chr08: 68799628-68800627 Eucalyptus grandis
Eucgr.H04941 2.0kb upstream 2.0kb upstream 5764 true Chr08: 68793864-68799627 Eucalyptus grandis
Eucgr.H04941 2.0kb upstream 2.0kb upstream 2000 false Chr08: 68793864-68795863 Eucalyptus grandis
Eucgr.H04941 2.0kb downstream 2.0kb downstream 5764 true Chr08: 68795864-68801627 Eucalyptus grandis
Eucgr.H04941 2.0kb downstream 2.0kb downstream 2000 false Chr08: 68799628-68801627 Eucalyptus grandis
Eucgr.H04941 5.0kb upstream 5.0kb upstream 8764 true Chr08: 68790864-68799627 Eucalyptus grandis
Eucgr.H04941 5.0kb upstream 5.0kb upstream 5000 false Chr08: 68790864-68795863 Eucalyptus grandis
Eucgr.H04941 5.0kb downstream 5.0kb downstream 8764 true Chr08: 68795864-68804627 Eucalyptus grandis
Eucgr.H04941 5.0kb downstream 5.0kb downstream 5000 false Chr08: 68799628-68804627 Eucalyptus grandis
Eucgr.H04941 10.0kb upstream 10.0kb upstream 13764 true Chr08: 68785864-68799627 Eucalyptus grandis
Eucgr.H04941 10.0kb upstream 10.0kb upstream 10000 false Chr08: 68785864-68795863 Eucalyptus grandis
Eucgr.H04941 10.0kb downstream 10.0kb downstream 13764 true Chr08: 68795864-68809627 Eucalyptus grandis
Eucgr.H04941 10.0kb downstream 10.0kb downstream 10000 false Chr08: 68799628-68809627 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060746 5270 Rosid View MSA
123739029 5271 Pentapetalae View MSA
122790801 5272 Eudicot View MSA
122045514 5273 Angiosperm View MSA
121347003 5274 Embryophyte View MSA
123426570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6362 0.0 40.7899    
cufflinks 15.2334 0.0 36.1212    
cufflinks 14.0449 0.0 45.2317    
cufflinks 9.61107 0.0 24.4176   Low
cufflinks 15.7638 0.0 44.7287    
cufflinks 15.8933 0.0 37.846    

0 Strain