Gene : Eucgr.H04871 E. grandis v2.0
Defline:  (1 of 1) KOG0081 - GTPase Rab27, small G protein superfamily Genomic Order:  3852
Name:  ? Eucgr.H04871 Secondary Identifier:  ? PAC:32042415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04871 0.5kb upstream 0.5kb upstream 5189 true Chr08: 67885181-67890369 Eucalyptus grandis
Eucgr.H04871 0.5kb upstream 0.5kb upstream 500 false Chr08: 67889870-67890369 Eucalyptus grandis
Eucgr.H04871 0.5kb downstream 0.5kb downstream 5189 true Chr08: 67884681-67889869 Eucalyptus grandis
Eucgr.H04871 0.5kb downstream 0.5kb downstream 500 false Chr08: 67884681-67885180 Eucalyptus grandis
Eucgr.H04871 1.0kb upstream 1.0kb upstream 5689 true Chr08: 67885181-67890869 Eucalyptus grandis
Eucgr.H04871 1.0kb upstream 1.0kb upstream 1000 false Chr08: 67889870-67890869 Eucalyptus grandis
Eucgr.H04871 1.0kb downstream 1.0kb downstream 5689 true Chr08: 67884181-67889869 Eucalyptus grandis
Eucgr.H04871 1.0kb downstream 1.0kb downstream 1000 false Chr08: 67884181-67885180 Eucalyptus grandis
Eucgr.H04871 2.0kb upstream 2.0kb upstream 6689 true Chr08: 67885181-67891869 Eucalyptus grandis
Eucgr.H04871 2.0kb upstream 2.0kb upstream 2000 false Chr08: 67889870-67891869 Eucalyptus grandis
Eucgr.H04871 2.0kb downstream 2.0kb downstream 6689 true Chr08: 67883181-67889869 Eucalyptus grandis
Eucgr.H04871 2.0kb downstream 2.0kb downstream 2000 false Chr08: 67883181-67885180 Eucalyptus grandis
Eucgr.H04871 5.0kb upstream 5.0kb upstream 9689 true Chr08: 67885181-67894869 Eucalyptus grandis
Eucgr.H04871 5.0kb upstream 5.0kb upstream 5000 false Chr08: 67889870-67894869 Eucalyptus grandis
Eucgr.H04871 5.0kb downstream 5.0kb downstream 9689 true Chr08: 67880181-67889869 Eucalyptus grandis
Eucgr.H04871 5.0kb downstream 5.0kb downstream 5000 false Chr08: 67880181-67885180 Eucalyptus grandis
Eucgr.H04871 10.0kb upstream 10.0kb upstream 14689 true Chr08: 67885181-67899869 Eucalyptus grandis
Eucgr.H04871 10.0kb upstream 10.0kb upstream 10000 false Chr08: 67889870-67899869 Eucalyptus grandis
Eucgr.H04871 10.0kb downstream 10.0kb downstream 14689 true Chr08: 67875181-67889869 Eucalyptus grandis
Eucgr.H04871 10.0kb downstream 10.0kb downstream 10000 false Chr08: 67875181-67885180 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064941 5270 Rosid View MSA
123738246 5271 Pentapetalae View MSA
122786291 5272 Eudicot View MSA
122044978 5273 Angiosperm View MSA
121310378 5274 Embryophyte View MSA
123427949 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.75027 0.0 24.1557    
cufflinks 23.6277 0.0 63.8755   High
cufflinks 7.85356 0.0 20.6389   Low
cufflinks 27.6005 0.0 74.7968   High
cufflinks 11.0301 0.0 27.6528    
cufflinks 14.3633 0.0 35.4468    

0 Strain