Gene : Eucgr.H04646 E. grandis v2.0
Defline:  (1 of 6) PTHR10509:SF20 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  3660
Name:  ? Eucgr.H04646 Secondary Identifier:  ? PAC:32044630
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5391 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04646 0.5kb upstream 0.5kb upstream 3034 true Chr08: 65311583-65314616 Eucalyptus grandis
Eucgr.H04646 0.5kb upstream 0.5kb upstream 500 false Chr08: 65314117-65314616 Eucalyptus grandis
Eucgr.H04646 0.5kb downstream 0.5kb downstream 3034 true Chr08: 65311083-65314116 Eucalyptus grandis
Eucgr.H04646 0.5kb downstream 0.5kb downstream 500 false Chr08: 65311083-65311582 Eucalyptus grandis
Eucgr.H04646 1.0kb upstream 1.0kb upstream 3534 true Chr08: 65311583-65315116 Eucalyptus grandis
Eucgr.H04646 1.0kb upstream 1.0kb upstream 1000 false Chr08: 65314117-65315116 Eucalyptus grandis
Eucgr.H04646 1.0kb downstream 1.0kb downstream 3534 true Chr08: 65310583-65314116 Eucalyptus grandis
Eucgr.H04646 1.0kb downstream 1.0kb downstream 1000 false Chr08: 65310583-65311582 Eucalyptus grandis
Eucgr.H04646 2.0kb upstream 2.0kb upstream 4534 true Chr08: 65311583-65316116 Eucalyptus grandis
Eucgr.H04646 2.0kb upstream 2.0kb upstream 2000 false Chr08: 65314117-65316116 Eucalyptus grandis
Eucgr.H04646 2.0kb downstream 2.0kb downstream 4534 true Chr08: 65309583-65314116 Eucalyptus grandis
Eucgr.H04646 2.0kb downstream 2.0kb downstream 2000 false Chr08: 65309583-65311582 Eucalyptus grandis
Eucgr.H04646 5.0kb upstream 5.0kb upstream 7534 true Chr08: 65311583-65319116 Eucalyptus grandis
Eucgr.H04646 5.0kb upstream 5.0kb upstream 5000 false Chr08: 65314117-65319116 Eucalyptus grandis
Eucgr.H04646 5.0kb downstream 5.0kb downstream 7534 true Chr08: 65306583-65314116 Eucalyptus grandis
Eucgr.H04646 5.0kb downstream 5.0kb downstream 5000 false Chr08: 65306583-65311582 Eucalyptus grandis
Eucgr.H04646 10.0kb upstream 10.0kb upstream 12534 true Chr08: 65311583-65324116 Eucalyptus grandis
Eucgr.H04646 10.0kb upstream 10.0kb upstream 10000 false Chr08: 65314117-65324116 Eucalyptus grandis
Eucgr.H04646 10.0kb downstream 10.0kb downstream 12534 true Chr08: 65301583-65314116 Eucalyptus grandis
Eucgr.H04646 10.0kb downstream 10.0kb downstream 10000 false Chr08: 65301583-65311582 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.7636 0.0 152.787 High  
cufflinks 0.630023 0.0 2.44616 Low Low
cufflinks 39.7043 0.0 99.8514 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.4982 0.0 35.7071    
cufflinks 8.03108 0.0 20.1447    

0 Strain