Gene : Eucgr.H04640 E. grandis v2.0
Defline:  (1 of 3) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  3654
Name:  ? Eucgr.H04640 Secondary Identifier:  ? PAC:32040902
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04640 0.5kb upstream 0.5kb upstream 2511 true Chr08: 65225721-65228231 Eucalyptus grandis
Eucgr.H04640 0.5kb upstream 0.5kb upstream 500 false Chr08: 65227732-65228231 Eucalyptus grandis
Eucgr.H04640 0.5kb downstream 0.5kb downstream 2511 true Chr08: 65225221-65227731 Eucalyptus grandis
Eucgr.H04640 0.5kb downstream 0.5kb downstream 500 false Chr08: 65225221-65225720 Eucalyptus grandis
Eucgr.H04640 1.0kb upstream 1.0kb upstream 3011 true Chr08: 65225721-65228731 Eucalyptus grandis
Eucgr.H04640 1.0kb upstream 1.0kb upstream 1000 false Chr08: 65227732-65228731 Eucalyptus grandis
Eucgr.H04640 1.0kb downstream 1.0kb downstream 3011 true Chr08: 65224721-65227731 Eucalyptus grandis
Eucgr.H04640 1.0kb downstream 1.0kb downstream 1000 false Chr08: 65224721-65225720 Eucalyptus grandis
Eucgr.H04640 2.0kb upstream 2.0kb upstream 4011 true Chr08: 65225721-65229731 Eucalyptus grandis
Eucgr.H04640 2.0kb upstream 2.0kb upstream 2000 false Chr08: 65227732-65229731 Eucalyptus grandis
Eucgr.H04640 2.0kb downstream 2.0kb downstream 4011 true Chr08: 65223721-65227731 Eucalyptus grandis
Eucgr.H04640 2.0kb downstream 2.0kb downstream 2000 false Chr08: 65223721-65225720 Eucalyptus grandis
Eucgr.H04640 5.0kb upstream 5.0kb upstream 7011 true Chr08: 65225721-65232731 Eucalyptus grandis
Eucgr.H04640 5.0kb upstream 5.0kb upstream 5000 false Chr08: 65227732-65232731 Eucalyptus grandis
Eucgr.H04640 5.0kb downstream 5.0kb downstream 7011 true Chr08: 65220721-65227731 Eucalyptus grandis
Eucgr.H04640 5.0kb downstream 5.0kb downstream 5000 false Chr08: 65220721-65225720 Eucalyptus grandis
Eucgr.H04640 10.0kb upstream 10.0kb upstream 12011 true Chr08: 65225721-65237731 Eucalyptus grandis
Eucgr.H04640 10.0kb upstream 10.0kb upstream 10000 false Chr08: 65227732-65237731 Eucalyptus grandis
Eucgr.H04640 10.0kb downstream 10.0kb downstream 12011 true Chr08: 65215721-65227731 Eucalyptus grandis
Eucgr.H04640 10.0kb downstream 10.0kb downstream 10000 false Chr08: 65215721-65225720 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.175 0.0 70.6583 High  
cufflinks 751.836 0.0 2827.45 High High
cufflinks 28.7401 0.0 66.1476 High  
cufflinks 364.484 0.0 1061.93 High  
cufflinks 297.506 0.0 829.329 High  
cufflinks 42.8797 0.0 112.372 High  

0 Strain