Gene : Eucgr.I00208 E. grandis v2.0
Defline:  (1 of 4) PF02364//PF04652//PF14288 - 1,3-beta-glucan synthase component (Glucan_synthase) // Vta1 like (Vta1) // 1,3-beta-glucan synthase subunit FKS1, domain-1 (FKS1_dom1) Genomic Order:  158
Name:  ? Eucgr.I00208 Secondary Identifier:  ? PAC:32065394
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6773 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00208 0.5kb upstream 0.5kb upstream 15415 true Chr09: 4373527-4388941 Eucalyptus grandis
Eucgr.I00208 0.5kb upstream 0.5kb upstream 500 false Chr09: 4373527-4374026 Eucalyptus grandis
Eucgr.I00208 0.5kb downstream 0.5kb downstream 15415 true Chr09: 4374027-4389441 Eucalyptus grandis
Eucgr.I00208 0.5kb downstream 0.5kb downstream 500 false Chr09: 4388942-4389441 Eucalyptus grandis
Eucgr.I00208 1.0kb upstream 1.0kb upstream 15915 true Chr09: 4373027-4388941 Eucalyptus grandis
Eucgr.I00208 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4373027-4374026 Eucalyptus grandis
Eucgr.I00208 1.0kb downstream 1.0kb downstream 15915 true Chr09: 4374027-4389941 Eucalyptus grandis
Eucgr.I00208 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4388942-4389941 Eucalyptus grandis
Eucgr.I00208 2.0kb upstream 2.0kb upstream 16915 true Chr09: 4372027-4388941 Eucalyptus grandis
Eucgr.I00208 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4372027-4374026 Eucalyptus grandis
Eucgr.I00208 2.0kb downstream 2.0kb downstream 16915 true Chr09: 4374027-4390941 Eucalyptus grandis
Eucgr.I00208 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4388942-4390941 Eucalyptus grandis
Eucgr.I00208 5.0kb upstream 5.0kb upstream 19915 true Chr09: 4369027-4388941 Eucalyptus grandis
Eucgr.I00208 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4369027-4374026 Eucalyptus grandis
Eucgr.I00208 5.0kb downstream 5.0kb downstream 19915 true Chr09: 4374027-4393941 Eucalyptus grandis
Eucgr.I00208 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4388942-4393941 Eucalyptus grandis
Eucgr.I00208 10.0kb upstream 10.0kb upstream 24915 true Chr09: 4364027-4388941 Eucalyptus grandis
Eucgr.I00208 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4364027-4374026 Eucalyptus grandis
Eucgr.I00208 10.0kb downstream 10.0kb downstream 24915 true Chr09: 4374027-4398941 Eucalyptus grandis
Eucgr.I00208 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4388942-4398941 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0371317 0.0 0.138845 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.034674 0.0 0.129977 Low  
cufflinks 0.0317347 0.0 0.119568 Low  
cufflinks 0.148563 0.0 0.459515 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain