Gene : Eucgr.I00216 E. grandis v2.0
Defline:  (1 of 1) PTHR11177//PTHR11177:SF187 - CHITINASE Genomic Order:  166
Name:  ? Eucgr.I00216 Secondary Identifier:  ? PAC:32065514
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6902 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00216 0.5kb upstream 0.5kb upstream 1163 true Chr09: 4527826-4528988 Eucalyptus grandis
Eucgr.I00216 0.5kb upstream 0.5kb upstream 500 false Chr09: 4528489-4528988 Eucalyptus grandis
Eucgr.I00216 0.5kb downstream 0.5kb downstream 1163 true Chr09: 4527326-4528488 Eucalyptus grandis
Eucgr.I00216 0.5kb downstream 0.5kb downstream 500 false Chr09: 4527326-4527825 Eucalyptus grandis
Eucgr.I00216 1.0kb upstream 1.0kb upstream 1663 true Chr09: 4527826-4529488 Eucalyptus grandis
Eucgr.I00216 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4528489-4529488 Eucalyptus grandis
Eucgr.I00216 1.0kb downstream 1.0kb downstream 1663 true Chr09: 4526826-4528488 Eucalyptus grandis
Eucgr.I00216 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4526826-4527825 Eucalyptus grandis
Eucgr.I00216 2.0kb upstream 2.0kb upstream 2663 true Chr09: 4527826-4530488 Eucalyptus grandis
Eucgr.I00216 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4528489-4530488 Eucalyptus grandis
Eucgr.I00216 2.0kb downstream 2.0kb downstream 2663 true Chr09: 4525826-4528488 Eucalyptus grandis
Eucgr.I00216 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4525826-4527825 Eucalyptus grandis
Eucgr.I00216 5.0kb upstream 5.0kb upstream 5663 true Chr09: 4527826-4533488 Eucalyptus grandis
Eucgr.I00216 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4528489-4533488 Eucalyptus grandis
Eucgr.I00216 5.0kb downstream 5.0kb downstream 5663 true Chr09: 4522826-4528488 Eucalyptus grandis
Eucgr.I00216 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4522826-4527825 Eucalyptus grandis
Eucgr.I00216 10.0kb upstream 10.0kb upstream 10663 true Chr09: 4527826-4538488 Eucalyptus grandis
Eucgr.I00216 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4528489-4538488 Eucalyptus grandis
Eucgr.I00216 10.0kb downstream 10.0kb downstream 10663 true Chr09: 4517826-4528488 Eucalyptus grandis
Eucgr.I00216 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4517826-4527825 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051168 5270 Rosid View MSA
123757988 5271 Pentapetalae View MSA
122778989 5272 Eudicot View MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain