Gene : Eucgr.I00183 E. grandis v2.0
Defline:  (1 of 2) PTHR10857//PTHR10857:SF18 - COPINE Genomic Order:  134
Name:  ? Eucgr.I00183 Secondary Identifier:  ? PAC:32065438
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00183 0.5kb upstream 0.5kb upstream 6245 true Chr09: 3788276-3794520 Eucalyptus grandis
Eucgr.I00183 0.5kb upstream 0.5kb upstream 500 false Chr09: 3794021-3794520 Eucalyptus grandis
Eucgr.I00183 0.5kb downstream 0.5kb downstream 6245 true Chr09: 3787776-3794020 Eucalyptus grandis
Eucgr.I00183 0.5kb downstream 0.5kb downstream 500 false Chr09: 3787776-3788275 Eucalyptus grandis
Eucgr.I00183 1.0kb upstream 1.0kb upstream 6745 true Chr09: 3788276-3795020 Eucalyptus grandis
Eucgr.I00183 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3794021-3795020 Eucalyptus grandis
Eucgr.I00183 1.0kb downstream 1.0kb downstream 6745 true Chr09: 3787276-3794020 Eucalyptus grandis
Eucgr.I00183 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3787276-3788275 Eucalyptus grandis
Eucgr.I00183 2.0kb upstream 2.0kb upstream 7745 true Chr09: 3788276-3796020 Eucalyptus grandis
Eucgr.I00183 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3794021-3796020 Eucalyptus grandis
Eucgr.I00183 2.0kb downstream 2.0kb downstream 7745 true Chr09: 3786276-3794020 Eucalyptus grandis
Eucgr.I00183 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3786276-3788275 Eucalyptus grandis
Eucgr.I00183 5.0kb upstream 5.0kb upstream 10745 true Chr09: 3788276-3799020 Eucalyptus grandis
Eucgr.I00183 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3794021-3799020 Eucalyptus grandis
Eucgr.I00183 5.0kb downstream 5.0kb downstream 10745 true Chr09: 3783276-3794020 Eucalyptus grandis
Eucgr.I00183 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3783276-3788275 Eucalyptus grandis
Eucgr.I00183 10.0kb upstream 10.0kb upstream 15745 true Chr09: 3788276-3804020 Eucalyptus grandis
Eucgr.I00183 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3794021-3804020 Eucalyptus grandis
Eucgr.I00183 10.0kb downstream 10.0kb downstream 15745 true Chr09: 3778276-3794020 Eucalyptus grandis
Eucgr.I00183 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3778276-3788275 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7369 0.0 36.0688    
cufflinks 10.1082 0.0 23.4103    
cufflinks 18.0993 0.0 46.9247    
cufflinks 14.7878 0.0 38.5949    
cufflinks 16.9132 0.0 38.8993    
cufflinks 7.47492 0.0 21.5078   Low

0 Strain