Gene : Eucgr.I00184 E. grandis v2.0
Defline:  (1 of 2) PTHR10857//PTHR10857:SF18 - COPINE Genomic Order:  135
Name:  ? Eucgr.I00184 Secondary Identifier:  ? PAC:32064287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00184 0.5kb upstream 0.5kb upstream 3973 true Chr09: 3799635-3803607 Eucalyptus grandis
Eucgr.I00184 0.5kb upstream 0.5kb upstream 500 false Chr09: 3803108-3803607 Eucalyptus grandis
Eucgr.I00184 0.5kb downstream 0.5kb downstream 3973 true Chr09: 3799135-3803107 Eucalyptus grandis
Eucgr.I00184 0.5kb downstream 0.5kb downstream 500 false Chr09: 3799135-3799634 Eucalyptus grandis
Eucgr.I00184 1.0kb upstream 1.0kb upstream 4473 true Chr09: 3799635-3804107 Eucalyptus grandis
Eucgr.I00184 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3803108-3804107 Eucalyptus grandis
Eucgr.I00184 1.0kb downstream 1.0kb downstream 4473 true Chr09: 3798635-3803107 Eucalyptus grandis
Eucgr.I00184 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3798635-3799634 Eucalyptus grandis
Eucgr.I00184 2.0kb upstream 2.0kb upstream 5473 true Chr09: 3799635-3805107 Eucalyptus grandis
Eucgr.I00184 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3803108-3805107 Eucalyptus grandis
Eucgr.I00184 2.0kb downstream 2.0kb downstream 5473 true Chr09: 3797635-3803107 Eucalyptus grandis
Eucgr.I00184 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3797635-3799634 Eucalyptus grandis
Eucgr.I00184 5.0kb upstream 5.0kb upstream 8473 true Chr09: 3799635-3808107 Eucalyptus grandis
Eucgr.I00184 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3803108-3808107 Eucalyptus grandis
Eucgr.I00184 5.0kb downstream 5.0kb downstream 8473 true Chr09: 3794635-3803107 Eucalyptus grandis
Eucgr.I00184 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3794635-3799634 Eucalyptus grandis
Eucgr.I00184 10.0kb upstream 10.0kb upstream 13473 true Chr09: 3799635-3813107 Eucalyptus grandis
Eucgr.I00184 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3803108-3813107 Eucalyptus grandis
Eucgr.I00184 10.0kb downstream 10.0kb downstream 13473 true Chr09: 3789635-3803107 Eucalyptus grandis
Eucgr.I00184 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3789635-3799634 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.1958 0.0 96.0895 High  
cufflinks 16.8816 0.0 39.4382   Low
cufflinks 47.4496 0.0 105.268 High  
cufflinks 33.5768 0.0 75.1602    
cufflinks 40.7781 0.0 90.6812 High  
cufflinks 36.9893 0.0 82.9626 High  

0 Strain