Gene : Eucgr.I00019 E. grandis v2.0
Defline:  (1 of 1) PTHR15856//PTHR15856:SF29 - PHD FINGER PROTEIN 20-RELATED Genomic Order:  17
Name:  ? Eucgr.I00019 Secondary Identifier:  ? PAC:32063469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00019 0.5kb upstream 0.5kb upstream 4578 true Chr09: 248394-252971 Eucalyptus grandis
Eucgr.I00019 0.5kb upstream 0.5kb upstream 500 false Chr09: 248394-248893 Eucalyptus grandis
Eucgr.I00019 0.5kb downstream 0.5kb downstream 4578 true Chr09: 248894-253471 Eucalyptus grandis
Eucgr.I00019 0.5kb downstream 0.5kb downstream 500 false Chr09: 252972-253471 Eucalyptus grandis
Eucgr.I00019 1.0kb upstream 1.0kb upstream 5078 true Chr09: 247894-252971 Eucalyptus grandis
Eucgr.I00019 1.0kb upstream 1.0kb upstream 1000 false Chr09: 247894-248893 Eucalyptus grandis
Eucgr.I00019 1.0kb downstream 1.0kb downstream 5078 true Chr09: 248894-253971 Eucalyptus grandis
Eucgr.I00019 1.0kb downstream 1.0kb downstream 1000 false Chr09: 252972-253971 Eucalyptus grandis
Eucgr.I00019 2.0kb upstream 2.0kb upstream 6078 true Chr09: 246894-252971 Eucalyptus grandis
Eucgr.I00019 2.0kb upstream 2.0kb upstream 2000 false Chr09: 246894-248893 Eucalyptus grandis
Eucgr.I00019 2.0kb downstream 2.0kb downstream 6078 true Chr09: 248894-254971 Eucalyptus grandis
Eucgr.I00019 2.0kb downstream 2.0kb downstream 2000 false Chr09: 252972-254971 Eucalyptus grandis
Eucgr.I00019 5.0kb upstream 5.0kb upstream 9078 true Chr09: 243894-252971 Eucalyptus grandis
Eucgr.I00019 5.0kb upstream 5.0kb upstream 5000 false Chr09: 243894-248893 Eucalyptus grandis
Eucgr.I00019 5.0kb downstream 5.0kb downstream 9078 true Chr09: 248894-257971 Eucalyptus grandis
Eucgr.I00019 5.0kb downstream 5.0kb downstream 5000 false Chr09: 252972-257971 Eucalyptus grandis
Eucgr.I00019 10.0kb upstream 10.0kb upstream 14078 true Chr09: 238894-252971 Eucalyptus grandis
Eucgr.I00019 10.0kb upstream 10.0kb upstream 10000 false Chr09: 238894-248893 Eucalyptus grandis
Eucgr.I00019 10.0kb downstream 10.0kb downstream 14078 true Chr09: 248894-262971 Eucalyptus grandis
Eucgr.I00019 10.0kb downstream 10.0kb downstream 10000 false Chr09: 252972-262971 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069901 5270 Rosid View MSA
123741706 5271 Pentapetalae View MSA
122793317 5272 Eudicot View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4935 0.0 36.5421   High
cufflinks 12.9991 0.0 28.9677    
cufflinks 15.2457 0.0 33.8253    
cufflinks 10.3092 0.0 23.1454   Low
cufflinks 11.7187 0.0 26.2041    
cufflinks 15.362 0.0 34.0645    

0 Strain