Gene : Eucgr.H05077 E. grandis v2.0
Defline:  (1 of 7) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  4044
Name:  ? Eucgr.H05077 Secondary Identifier:  ? PAC:32040993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H05077 0.5kb upstream 0.5kb upstream 4838 true Chr08: 71883988-71888825 Eucalyptus grandis
Eucgr.H05077 0.5kb upstream 0.5kb upstream 500 false Chr08: 71888326-71888825 Eucalyptus grandis
Eucgr.H05077 0.5kb downstream 0.5kb downstream 4838 true Chr08: 71883488-71888325 Eucalyptus grandis
Eucgr.H05077 0.5kb downstream 0.5kb downstream 500 false Chr08: 71883488-71883987 Eucalyptus grandis
Eucgr.H05077 1.0kb upstream 1.0kb upstream 5338 true Chr08: 71883988-71889325 Eucalyptus grandis
Eucgr.H05077 1.0kb upstream 1.0kb upstream 1000 false Chr08: 71888326-71889325 Eucalyptus grandis
Eucgr.H05077 1.0kb downstream 1.0kb downstream 5338 true Chr08: 71882988-71888325 Eucalyptus grandis
Eucgr.H05077 1.0kb downstream 1.0kb downstream 1000 false Chr08: 71882988-71883987 Eucalyptus grandis
Eucgr.H05077 2.0kb upstream 2.0kb upstream 6338 true Chr08: 71883988-71890325 Eucalyptus grandis
Eucgr.H05077 2.0kb upstream 2.0kb upstream 2000 false Chr08: 71888326-71890325 Eucalyptus grandis
Eucgr.H05077 2.0kb downstream 2.0kb downstream 6338 true Chr08: 71881988-71888325 Eucalyptus grandis
Eucgr.H05077 2.0kb downstream 2.0kb downstream 2000 false Chr08: 71881988-71883987 Eucalyptus grandis
Eucgr.H05077 5.0kb upstream 5.0kb upstream 9338 true Chr08: 71883988-71893325 Eucalyptus grandis
Eucgr.H05077 5.0kb upstream 5.0kb upstream 5000 false Chr08: 71888326-71893325 Eucalyptus grandis
Eucgr.H05077 5.0kb downstream 5.0kb downstream 9338 true Chr08: 71878988-71888325 Eucalyptus grandis
Eucgr.H05077 5.0kb downstream 5.0kb downstream 5000 false Chr08: 71878988-71883987 Eucalyptus grandis
Eucgr.H05077 10.0kb upstream 10.0kb upstream 14338 true Chr08: 71883988-71898325 Eucalyptus grandis
Eucgr.H05077 10.0kb upstream 10.0kb upstream 10000 false Chr08: 71888326-71898325 Eucalyptus grandis
Eucgr.H05077 10.0kb downstream 10.0kb downstream 14338 true Chr08: 71873988-71888325 Eucalyptus grandis
Eucgr.H05077 10.0kb downstream 10.0kb downstream 10000 false Chr08: 71873988-71883987 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.20873 0.0 3.223   Low
cufflinks 75.3097 0.0 178.781 High High
cufflinks 1.17229 0.0 3.12379   Low
cufflinks 51.7145 0.0 119.301 High High
cufflinks 6.3957 0.0 14.5844    
cufflinks 5.56365 0.0 12.8686    

0 Strain