Gene : Eucgr.H05059 E. grandis v2.0
Defline:  (1 of 3) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  4061
Name:  ? Eucgr.H05059 Secondary Identifier:  ? PAC:32044938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H05059 0.5kb upstream 0.5kb upstream 4968 true Chr08: 72063974-72068941 Eucalyptus grandis
Eucgr.H05059 0.5kb upstream 0.5kb upstream 500 false Chr08: 72063974-72064473 Eucalyptus grandis
Eucgr.H05059 0.5kb downstream 0.5kb downstream 4968 true Chr08: 72064474-72069441 Eucalyptus grandis
Eucgr.H05059 0.5kb downstream 0.5kb downstream 500 false Chr08: 72068942-72069441 Eucalyptus grandis
Eucgr.H05059 1.0kb upstream 1.0kb upstream 5468 true Chr08: 72063474-72068941 Eucalyptus grandis
Eucgr.H05059 1.0kb upstream 1.0kb upstream 1000 false Chr08: 72063474-72064473 Eucalyptus grandis
Eucgr.H05059 1.0kb downstream 1.0kb downstream 5468 true Chr08: 72064474-72069941 Eucalyptus grandis
Eucgr.H05059 1.0kb downstream 1.0kb downstream 1000 false Chr08: 72068942-72069941 Eucalyptus grandis
Eucgr.H05059 2.0kb upstream 2.0kb upstream 6468 true Chr08: 72062474-72068941 Eucalyptus grandis
Eucgr.H05059 2.0kb upstream 2.0kb upstream 2000 false Chr08: 72062474-72064473 Eucalyptus grandis
Eucgr.H05059 2.0kb downstream 2.0kb downstream 6468 true Chr08: 72064474-72070941 Eucalyptus grandis
Eucgr.H05059 2.0kb downstream 2.0kb downstream 2000 false Chr08: 72068942-72070941 Eucalyptus grandis
Eucgr.H05059 5.0kb upstream 5.0kb upstream 9468 true Chr08: 72059474-72068941 Eucalyptus grandis
Eucgr.H05059 5.0kb upstream 5.0kb upstream 5000 false Chr08: 72059474-72064473 Eucalyptus grandis
Eucgr.H05059 5.0kb downstream 5.0kb downstream 9468 true Chr08: 72064474-72073941 Eucalyptus grandis
Eucgr.H05059 5.0kb downstream 5.0kb downstream 5000 false Chr08: 72068942-72073941 Eucalyptus grandis
Eucgr.H05059 10.0kb upstream 10.0kb upstream 14468 true Chr08: 72054474-72068941 Eucalyptus grandis
Eucgr.H05059 10.0kb upstream 10.0kb upstream 10000 false Chr08: 72054474-72064473 Eucalyptus grandis
Eucgr.H05059 10.0kb downstream 10.0kb downstream 14468 true Chr08: 72064474-72078941 Eucalyptus grandis
Eucgr.H05059 10.0kb downstream 10.0kb downstream 10000 false Chr08: 72068942-72078941 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83349 0.0 9.71845    
cufflinks 3.05614 0.0 7.89746    
cufflinks 3.99654 0.0 11.7878    
cufflinks 1.02398 0.0 3.11791   Low
cufflinks 0.849208 0.0 2.79816   Low
cufflinks 4.65107 0.0 11.6665    

0 Strain