Gene : Eucgr.I00719 E. grandis v2.0
Defline:  (1 of 4) PTHR11141 - PROTEIN TRANSPORT PROTEIN SEC23 Genomic Order:  573
Name:  ? Eucgr.I00719 Secondary Identifier:  ? PAC:32063961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00719 0.5kb upstream 0.5kb upstream 11503 true Chr09: 14873676-14885178 Eucalyptus grandis
Eucgr.I00719 0.5kb upstream 0.5kb upstream 500 false Chr09: 14873676-14874175 Eucalyptus grandis
Eucgr.I00719 0.5kb downstream 0.5kb downstream 11503 true Chr09: 14874176-14885678 Eucalyptus grandis
Eucgr.I00719 0.5kb downstream 0.5kb downstream 500 false Chr09: 14885179-14885678 Eucalyptus grandis
Eucgr.I00719 1.0kb upstream 1.0kb upstream 12003 true Chr09: 14873176-14885178 Eucalyptus grandis
Eucgr.I00719 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14873176-14874175 Eucalyptus grandis
Eucgr.I00719 1.0kb downstream 1.0kb downstream 12003 true Chr09: 14874176-14886178 Eucalyptus grandis
Eucgr.I00719 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14885179-14886178 Eucalyptus grandis
Eucgr.I00719 2.0kb upstream 2.0kb upstream 13003 true Chr09: 14872176-14885178 Eucalyptus grandis
Eucgr.I00719 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14872176-14874175 Eucalyptus grandis
Eucgr.I00719 2.0kb downstream 2.0kb downstream 13003 true Chr09: 14874176-14887178 Eucalyptus grandis
Eucgr.I00719 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14885179-14887178 Eucalyptus grandis
Eucgr.I00719 5.0kb upstream 5.0kb upstream 16003 true Chr09: 14869176-14885178 Eucalyptus grandis
Eucgr.I00719 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14869176-14874175 Eucalyptus grandis
Eucgr.I00719 5.0kb downstream 5.0kb downstream 16003 true Chr09: 14874176-14890178 Eucalyptus grandis
Eucgr.I00719 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14885179-14890178 Eucalyptus grandis
Eucgr.I00719 10.0kb upstream 10.0kb upstream 21003 true Chr09: 14864176-14885178 Eucalyptus grandis
Eucgr.I00719 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14864176-14874175 Eucalyptus grandis
Eucgr.I00719 10.0kb downstream 10.0kb downstream 21003 true Chr09: 14874176-14895178 Eucalyptus grandis
Eucgr.I00719 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14885179-14895178 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061979 5270 Rosid View MSA
123740886 5271 Pentapetalae View MSA
122793280 5272 Eudicot View MSA
122046887 5273 Angiosperm View MSA
121348482 5274 Embryophyte View MSA
123424383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.5929 0.0 59.1304    
cufflinks 30.5539 0.0 68.3287    
cufflinks 28.5449 0.0 63.6141 High  
cufflinks 55.0995 0.0 127.462 High High
cufflinks 18.6812 0.0 41.3218   Low
cufflinks 39.3343 0.0 88.7438 High  

0 Strain