Gene : Eucgr.I00388 E. grandis v2.0
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  319
Name:  ? Eucgr.I00388 Secondary Identifier:  ? PAC:32064736
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5466 Eucalyptus grandis pathologic  
Egrandis PWY-6824 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00388 0.5kb upstream 0.5kb upstream 3862 true Chr09: 7340582-7344443 Eucalyptus grandis
Eucgr.I00388 0.5kb upstream 0.5kb upstream 500 false Chr09: 7343944-7344443 Eucalyptus grandis
Eucgr.I00388 0.5kb downstream 0.5kb downstream 3862 true Chr09: 7340082-7343943 Eucalyptus grandis
Eucgr.I00388 0.5kb downstream 0.5kb downstream 500 false Chr09: 7340082-7340581 Eucalyptus grandis
Eucgr.I00388 1.0kb upstream 1.0kb upstream 4362 true Chr09: 7340582-7344943 Eucalyptus grandis
Eucgr.I00388 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7343944-7344943 Eucalyptus grandis
Eucgr.I00388 1.0kb downstream 1.0kb downstream 4362 true Chr09: 7339582-7343943 Eucalyptus grandis
Eucgr.I00388 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7339582-7340581 Eucalyptus grandis
Eucgr.I00388 2.0kb upstream 2.0kb upstream 5362 true Chr09: 7340582-7345943 Eucalyptus grandis
Eucgr.I00388 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7343944-7345943 Eucalyptus grandis
Eucgr.I00388 2.0kb downstream 2.0kb downstream 5362 true Chr09: 7338582-7343943 Eucalyptus grandis
Eucgr.I00388 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7338582-7340581 Eucalyptus grandis
Eucgr.I00388 5.0kb upstream 5.0kb upstream 8362 true Chr09: 7340582-7348943 Eucalyptus grandis
Eucgr.I00388 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7343944-7348943 Eucalyptus grandis
Eucgr.I00388 5.0kb downstream 5.0kb downstream 8362 true Chr09: 7335582-7343943 Eucalyptus grandis
Eucgr.I00388 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7335582-7340581 Eucalyptus grandis
Eucgr.I00388 10.0kb upstream 10.0kb upstream 13362 true Chr09: 7340582-7353943 Eucalyptus grandis
Eucgr.I00388 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7343944-7353943 Eucalyptus grandis
Eucgr.I00388 10.0kb downstream 10.0kb downstream 13362 true Chr09: 7330582-7343943 Eucalyptus grandis
Eucgr.I00388 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7330582-7340581 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain